Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.46■□□□□ 0.71
VMA21Q3ZAQ7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VMA21Q3ZAQ7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.45■□□□□ 0.7
VMA21Q3ZAQ7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VMA21Q3ZAQ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.45■□□□□ 0.7
VMA21Q3ZAQ7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VMA21Q3ZAQ7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 ERN1-208ENST00000606895 2068 ntBASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.44■□□□□ 0.7
VMA21Q3ZAQ7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VMA21Q3ZAQ7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VMA21Q3ZAQ7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VMA21Q3ZAQ7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 AC060814.1-201ENST00000554326 538 ntBASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VMA21Q3ZAQ7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.39■□□□□ 0.7
VMA21Q3ZAQ7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VMA21Q3ZAQ7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VMA21Q3ZAQ7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.39■□□□□ 0.69
VMA21Q3ZAQ7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VMA21Q3ZAQ7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VMA21Q3ZAQ7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VMA21Q3ZAQ7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.38■□□□□ 0.69
VMA21Q3ZAQ7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.38■□□□□ 0.69
VMA21Q3ZAQ7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 AL157400.5-201ENST00000507624 621 ntBASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 AC020928.2-201ENST00000588717 2197 ntBASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VMA21Q3ZAQ7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
VMA21Q3ZAQ7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VMA21Q3ZAQ7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.36■□□□□ 0.69
VMA21Q3ZAQ7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.36■□□□□ 0.69
VMA21Q3ZAQ7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 MIR3960-201ENST00000583311 91 ntBASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.35■□□□□ 0.69
VMA21Q3ZAQ7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 AC022413.1-201ENST00000624602 984 ntBASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.34■□□□□ 0.69
VMA21Q3ZAQ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
VMA21Q3ZAQ7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VMA21Q3ZAQ7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VMA21Q3ZAQ7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VMA21Q3ZAQ7 AC025884.2-201ENST00000553429 711 ntBASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms