Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PDE1AP54750 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.71■■■□□ 2.35
PDE1AP54750 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
PDE1AP54750 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.71■■■□□ 2.35
PDE1AP54750 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.7■■■□□ 2.35
PDE1AP54750 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
PDE1AP54750 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PDE1AP54750 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE1AP54750 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE1AP54750 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PDE1AP54750 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PDE1AP54750 AC096887.2-201ENST00000623443 1957 ntBASIC29.69■■■□□ 2.34
PDE1AP54750 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PDE1AP54750 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
PDE1AP54750 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PDE1AP54750 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PDE1AP54750 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
PDE1AP54750 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.68■■■□□ 2.34
PDE1AP54750 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PDE1AP54750 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
PDE1AP54750 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PDE1AP54750 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.67■■■□□ 2.34
PDE1AP54750 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.67■■■□□ 2.34
PDE1AP54750 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.67■■■□□ 2.34
PDE1AP54750 MIR3960-201ENST00000583311 91 ntBASIC29.67■■■□□ 2.34
PDE1AP54750 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PDE1AP54750 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
PDE1AP54750 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.67■■■□□ 2.34
PDE1AP54750 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PDE1AP54750 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PDE1AP54750 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PDE1AP54750 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.66■■■□□ 2.34
PDE1AP54750 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.66■■■□□ 2.34
PDE1AP54750 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.66■■■□□ 2.34
PDE1AP54750 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.65■■■□□ 2.34
PDE1AP54750 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
PDE1AP54750 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
PDE1AP54750 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.64■■■□□ 2.34
PDE1AP54750 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
PDE1AP54750 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC29.63■■■□□ 2.33
PDE1AP54750 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.63■■■□□ 2.33
PDE1AP54750 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDE1AP54750 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC29.63■■■□□ 2.33
PDE1AP54750 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PDE1AP54750 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PDE1AP54750 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.62■■■□□ 2.33
PDE1AP54750 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.62■■■□□ 2.33
PDE1AP54750 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.62■■■□□ 2.33
PDE1AP54750 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.62■■■□□ 2.33
PDE1AP54750 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PDE1AP54750 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PDE1AP54750 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.61■■■□□ 2.33
PDE1AP54750 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.61■■■□□ 2.33
PDE1AP54750 AC020928.2-201ENST00000588717 2197 ntBASIC29.61■■■□□ 2.33
PDE1AP54750 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PDE1AP54750 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PDE1AP54750 AC007029.1-201ENST00000604183 313 ntBASIC29.6■■■□□ 2.33
PDE1AP54750 RP9P-202ENST00000450133 1212 ntBASIC29.59■■■□□ 2.33
PDE1AP54750 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.59■■■□□ 2.33
PDE1AP54750 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.59■■■□□ 2.33
PDE1AP54750 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
PDE1AP54750 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
PDE1AP54750 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PDE1AP54750 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PDE1AP54750 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PDE1AP54750 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.58■■■□□ 2.33
PDE1AP54750 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.57■■■□□ 2.32
PDE1AP54750 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
PDE1AP54750 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDE1AP54750 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.56■■■□□ 2.32
PDE1AP54750 AC093536.1-201ENST00000569153 554 ntBASIC29.56■■■□□ 2.32
PDE1AP54750 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PDE1AP54750 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PDE1AP54750 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDE1AP54750 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
PDE1AP54750 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
PDE1AP54750 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
PDE1AP54750 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PDE1AP54750 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.54■■■□□ 2.32
PDE1AP54750 RNF126P1-201ENST00000567452 1320 ntBASIC29.54■■■□□ 2.32
PDE1AP54750 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
PDE1AP54750 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDE1AP54750 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.53■■■□□ 2.32
PDE1AP54750 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDE1AP54750 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
PDE1AP54750 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PDE1AP54750 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PDE1AP54750 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
PDE1AP54750 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PDE1AP54750 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PDE1AP54750 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PDE1AP54750 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PDE1AP54750 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.51■■■□□ 2.31
PDE1AP54750 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PDE1AP54750 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PDE1AP54750 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
PDE1AP54750 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PDE1AP54750 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PDE1AP54750 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PDE1AP54750 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms