Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VSIG8P0DPA2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VSIG8P0DPA2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L13-201ENST00000554103 1267 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L15-201ENST00000611059 1267 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L23-201ENST00000615195 1269 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L24-201ENST00000617576 1269 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L22-201ENST00000618238 1269 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L20-201ENST00000619712 1269 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L21-201ENST00000622058 1269 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L10-201ENST00000622460 1267 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 DUX4L25-201ENST00000624915 1269 ntBASIC20.64■□□□□ 0.89
VSIG8P0DPA2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.64■□□□□ 0.89
VSIG8P0DPA2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 AC148477.6-201ENST00000623746 465 ntBASIC20.63■□□□□ 0.89
VSIG8P0DPA2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VSIG8P0DPA2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VSIG8P0DPA2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.61■□□□□ 0.89
VSIG8P0DPA2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VSIG8P0DPA2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSIG8P0DPA2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSIG8P0DPA2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VSIG8P0DPA2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.6■□□□□ 0.89
VSIG8P0DPA2 AL359504.2-201ENST00000605506 1601 ntBASIC20.6■□□□□ 0.89
VSIG8P0DPA2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 AL359258.2-201ENST00000564063 1566 ntBASIC20.59■□□□□ 0.89
VSIG8P0DPA2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VSIG8P0DPA2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG8P0DPA2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG8P0DPA2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG8P0DPA2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VSIG8P0DPA2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VSIG8P0DPA2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VSIG8P0DPA2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VSIG8P0DPA2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VSIG8P0DPA2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VSIG8P0DPA2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG8P0DPA2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG8P0DPA2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG8P0DPA2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.55■□□□□ 0.88
VSIG8P0DPA2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VSIG8P0DPA2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VSIG8P0DPA2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 DUX4L11-201ENST00000611504 1267 ntBASIC20.53■□□□□ 0.88
VSIG8P0DPA2 DUX4L12-201ENST00000614593 1267 ntBASIC20.53■□□□□ 0.88
VSIG8P0DPA2 DUX4L14-201ENST00000621227 1267 ntBASIC20.53■□□□□ 0.88
VSIG8P0DPA2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VSIG8P0DPA2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms