Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.85■■□□□ 1.25
PDLIM1O00151 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDLIM1O00151 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
PDLIM1O00151 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDLIM1O00151 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDLIM1O00151 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDLIM1O00151 AC142472.1-201ENST00000612013 1741 ntBASIC22.84■■□□□ 1.25
PDLIM1O00151 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDLIM1O00151 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.84■■□□□ 1.25
PDLIM1O00151 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDLIM1O00151 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.83■■□□□ 1.25
PDLIM1O00151 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.83■■□□□ 1.25
PDLIM1O00151 LINC00273-201ENST00000539813 1452 ntBASIC22.83■■□□□ 1.25
PDLIM1O00151 AC142381.3-201ENST00000568208 1670 ntBASIC22.83■■□□□ 1.24
PDLIM1O00151 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PDLIM1O00151 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDLIM1O00151 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PDLIM1O00151 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDLIM1O00151 AC068473.5-201ENST00000616428 2072 ntBASIC22.82■■□□□ 1.24
PDLIM1O00151 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PDLIM1O00151 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.82■■□□□ 1.24
PDLIM1O00151 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDLIM1O00151 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDLIM1O00151 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDLIM1O00151 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDLIM1O00151 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.24
PDLIM1O00151 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDLIM1O00151 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.81■■□□□ 1.24
PDLIM1O00151 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PDLIM1O00151 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
PDLIM1O00151 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDLIM1O00151 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
PDLIM1O00151 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PDLIM1O00151 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDLIM1O00151 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDLIM1O00151 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.8■■□□□ 1.24
PDLIM1O00151 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDLIM1O00151 MIR7108-201ENST00000614319 87 ntBASIC22.79■■□□□ 1.24
PDLIM1O00151 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDLIM1O00151 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDLIM1O00151 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDLIM1O00151 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.78■■□□□ 1.24
PDLIM1O00151 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDLIM1O00151 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDLIM1O00151 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PDLIM1O00151 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDLIM1O00151 AL139125.2-201ENST00000623134 1869 ntBASIC22.78■■□□□ 1.24
PDLIM1O00151 AC138932.3-201ENST00000567634 1902 ntBASIC22.78■■□□□ 1.24
PDLIM1O00151 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.78■■□□□ 1.24
PDLIM1O00151 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PDLIM1O00151 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.77■■□□□ 1.24
PDLIM1O00151 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PDLIM1O00151 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PDLIM1O00151 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PDLIM1O00151 LINC01971-201ENST00000617888 1048 ntBASIC22.77■■□□□ 1.24
PDLIM1O00151 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDLIM1O00151 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.77■■□□□ 1.24
PDLIM1O00151 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PDLIM1O00151 AC010501.1-201ENST00000606270 1962 ntBASIC22.76■■□□□ 1.23
PDLIM1O00151 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDLIM1O00151 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.76■■□□□ 1.23
PDLIM1O00151 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PDLIM1O00151 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PDLIM1O00151 AC022211.4-201ENST00000625094 2161 ntBASIC22.76■■□□□ 1.23
PDLIM1O00151 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
PDLIM1O00151 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDLIM1O00151 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDLIM1O00151 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.75■■□□□ 1.23
PDLIM1O00151 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.75■■□□□ 1.23
PDLIM1O00151 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PDLIM1O00151 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDLIM1O00151 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDLIM1O00151 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDLIM1O00151 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDLIM1O00151 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.74■■□□□ 1.23
PDLIM1O00151 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDLIM1O00151 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDLIM1O00151 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDLIM1O00151 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDLIM1O00151 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDLIM1O00151 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDLIM1O00151 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDLIM1O00151 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDLIM1O00151 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.73■■□□□ 1.23
PDLIM1O00151 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.73■■□□□ 1.23
PDLIM1O00151 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PDLIM1O00151 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PDLIM1O00151 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PDLIM1O00151 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDLIM1O00151 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.72■■□□□ 1.23
PDLIM1O00151 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.72■■□□□ 1.23
PDLIM1O00151 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDLIM1O00151 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDLIM1O00151 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDLIM1O00151 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDLIM1O00151 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PDLIM1O00151 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms