Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYRM9A8MSI8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LYRM9A8MSI8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.27■□□□□ 0.36
LYRM9A8MSI8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.27■□□□□ 0.36
LYRM9A8MSI8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LYRM9A8MSI8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LYRM9A8MSI8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LYRM9A8MSI8 KRT18P10-201ENST00000388836 1287 ntBASIC17.27■□□□□ 0.36
LYRM9A8MSI8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LYRM9A8MSI8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 AL592293.1-201ENST00000502889 1188 ntBASIC17.26■□□□□ 0.35
LYRM9A8MSI8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LYRM9A8MSI8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.25■□□□□ 0.35
LYRM9A8MSI8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LYRM9A8MSI8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYRM9A8MSI8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYRM9A8MSI8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LYRM9A8MSI8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LYRM9A8MSI8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LYRM9A8MSI8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 AC018755.3-202ENST00000596210 929 ntBASIC17.22■□□□□ 0.35
LYRM9A8MSI8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.22■□□□□ 0.35
LYRM9A8MSI8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 KRT18P60-201ENST00000312876 1297 ntBASIC17.21■□□□□ 0.35
LYRM9A8MSI8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LYRM9A8MSI8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.21■□□□□ 0.34
LYRM9A8MSI8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LYRM9A8MSI8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 AC092803.2-201ENST00000564287 1899 ntBASIC17.2■□□□□ 0.34
LYRM9A8MSI8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
LYRM9A8MSI8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LYRM9A8MSI8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYRM9A8MSI8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYRM9A8MSI8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYRM9A8MSI8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYRM9A8MSI8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYRM9A8MSI8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LYRM9A8MSI8 MIR6765-201ENST00000614092 87 ntBASIC17.18■□□□□ 0.34
LYRM9A8MSI8 AC129492.7-201ENST00000622992 756 ntBASIC17.18■□□□□ 0.34
LYRM9A8MSI8 AC012354.3-201ENST00000623734 483 ntBASIC17.18■□□□□ 0.34
LYRM9A8MSI8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYRM9A8MSI8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms