Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 MIR3648-2-201ENST00000581792 180 ntBASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 MIR3648-1-201ENST00000615959 180 ntBASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 AC135731.1-201ENST00000569415 2548 ntBASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV10-1A0A0K0K1A3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV10-1A0A0K0K1A3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV10-1A0A0K0K1A3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRBV10-1A0A0K0K1A3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV10-1A0A0K0K1A3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV10-1A0A0K0K1A3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV10-1A0A0K0K1A3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AC142381.3-201ENST00000568208 1670 ntBASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-1A0A0K0K1A3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AC096887.2-201ENST00000623443 1957 ntBASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17■□□□□ 0.31
TRBV10-1A0A0K0K1A3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-1A0A0K0K1A3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-1A0A0K0K1A3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 AC016575.1-201ENST00000607026 382 ntBASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV10-1A0A0K0K1A3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV10-1A0A0K0K1A3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-1A0A0K0K1A3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-1A0A0K0K1A3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms