Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ARMC9-211ENST00000482392 724 ntTSL 215.92■□□□□ 0.144e-8■■□□□ 11.9
MATR3P43243 CTAGE5-216ENST00000556990 568 ntTSL 415.9■□□□□ 0.144e-8■■□□□ 11.9
MATR3P43243 ARMC9-205ENST00000440107 729 ntTSL 215.55■□□□□ 0.084e-8■■□□□ 11.9
MATR3P43243 SEPT9-212ENST00000586128 752 ntTSL 415.05■□□□□ -01e-10■■□□□ 11.9
MATR3P43243 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC14.37□□□□□ -0.114e-8■■□□□ 11.9
MATR3P43243 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC13.37□□□□□ -0.271e-10■■□□□ 11.9
MATR3P43243 SEPT9-213ENST00000586433 569 ntTSL 413.35□□□□□ -0.271e-10■■□□□ 11.9
MATR3P43243 SEPT9-238ENST00000591472 555 ntTSL 413.13□□□□□ -0.311e-10■■□□□ 11.9
MATR3P43243 SEPT9-239ENST00000591704 749 ntTSL 212.82□□□□□ -0.361e-10■■□□□ 11.9
MATR3P43243 SEPT9-247ENST00000593189 817 ntTSL 512.44□□□□□ -0.421e-10■■□□□ 11.9
MATR3P43243 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.464e-8■■□□□ 11.9
MATR3P43243 SEPT9-235ENST00000591020 582 ntTSL 412.2□□□□□ -0.461e-10■■□□□ 11.9
MATR3P43243 EXOC6-202ENST00000371543 2714 ntTSL 2 BASIC11.76□□□□□ -0.534e-6■■□□□ 11.9
MATR3P43243 OLMALINC-204ENST00000641571 1180 nt11.59□□□□□ -0.552e-13■■□□□ 11.9
MATR3P43243 SEPT9-234ENST00000590938 611 ntTSL 411.16□□□□□ -0.621e-10■■□□□ 11.9
MATR3P43243 OLMALINC-205ENST00000641708 1184 ntBASIC10.77□□□□□ -0.692e-13■■□□□ 11.9
MATR3P43243 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC10.48□□□□□ -0.732e-13■■□□□ 11.9
MATR3P43243 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC9.9□□□□□ -0.824e-6■■□□□ 11.9
MATR3P43243 OLMALINC-202ENST00000608396 1872 nt9.54□□□□□ -0.882e-13■■□□□ 11.9
MATR3P43243 OLMALINC-206ENST00000641799 1195 ntBASIC9.29□□□□□ -0.922e-13■■□□□ 11.9
MATR3P43243 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.964e-6■■□□□ 11.9
MATR3P43243 DPH6-207ENST00000560386 3438 ntTSL 1 (best)9.04□□□□□ -0.964e-8■■□□□ 11.9
MATR3P43243 OLMALINC-203ENST00000641087 3779 ntBASIC7.56□□□□□ -1.22e-13■■□□□ 11.9
MATR3P43243 CTAGE5-213ENST00000555716 558 ntTSL 47.28□□□□□ -1.244e-8■■□□□ 11.9
MATR3P43243 CTAGE5-211ENST00000554392 527 ntTSL 44.93□□□□□ -1.624e-8■■□□□ 11.9
MATR3P43243 DPH6-204ENST00000558973 484 ntTSL 53.8□□□□□ -1.84e-8■■□□□ 11.9
MATR3P43243 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.37□□□□□ -1.874e-6■■□□□ 11.9
MATR3P43243 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.32e-9■■□□□ 11.9
MATR3P43243 PTK2B-210ENST00000517339 3914 ntTSL 2 BASIC11.66□□□□□ -0.542e-9■■□□□ 11.9
MATR3P43243 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC10.54□□□□□ -0.722e-9■■□□□ 11.9
MATR3P43243 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.762e-9■■□□□ 11.9
MATR3P43243 MPP1-210ENST00000462825 587 ntTSL 414.4□□□□□ -0.13e-8■■□□□ 11.9
MATR3P43243 EML4-208ENST00000482660 584 ntTSL 419.32■□□□□ 0.689e-8■■□□□ 11.9
MATR3P43243 OGT-203ENST00000444774 556 ntTSL 412.11□□□□□ -0.471e-6■■□□□ 11.9
MATR3P43243 OGT-204ENST00000455587 632 ntTSL 39.21□□□□□ -0.941e-6■■□□□ 11.9
MATR3P43243 HGD-209ENST00000492108 631 ntTSL 27.67□□□□□ -1.181e-7■■□□□ 11.9
MATR3P43243 SAMD4A-207ENST00000555112 2287 ntTSL 1 (best)23.68■■□□□ 1.382e-6■■□□□ 11.9
MATR3P43243 DLGAP4-AS1-201ENST00000425233 443 ntTSL 517.08■□□□□ 0.323e-6■■□□□ 11.9
MATR3P43243 DLGAP4-AS1-204ENST00000559455 584 ntTSL 3 BASIC11.24□□□□□ -0.613e-6■■□□□ 11.9
MATR3P43243 MROH1-205ENST00000527552 5832 ntTSL 1 (best)15.05■□□□□ -03e-6■■□□□ 11.8
MATR3P43243 MTMR14-210ENST00000447144 1664 ntTSL 224.55■■□□□ 1.524e-6■■□□□ 11.8
MATR3P43243 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.484e-6■■□□□ 11.8
MATR3P43243 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.464e-6■■□□□ 11.8
MATR3P43243 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.034e-6■■□□□ 11.8
MATR3P43243 KIF2A-207ENST00000509663 759 ntTSL 321.5■■□□□ 1.035e-6■■□□□ 11.8
MATR3P43243 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.74e-6■■□□□ 11.8
MATR3P43243 NFIC-211ENST00000641145 8399 ntBASIC19.42■□□□□ 0.74e-6■■□□□ 11.8
MATR3P43243 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.42■□□□□ 0.544e-6■■□□□ 11.8
MATR3P43243 HERC1-207ENST00000560316 577 ntTSL 418.02■□□□□ 0.484e-6■■□□□ 11.8
MATR3P43243 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.444e-6■■□□□ 11.8
MATR3P43243 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.41■□□□□ 0.384e-6■■□□□ 11.8
MATR3P43243 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.374e-6■■□□□ 11.8
MATR3P43243 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.78■□□□□ 0.284e-6■■□□□ 11.8
MATR3P43243 MTMR14-204ENST00000414996 1746 ntTSL 1 (best)15.92■□□□□ 0.144e-6■■□□□ 11.8
MATR3P43243 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.83■□□□□ 0.124e-6■■□□□ 11.8
MATR3P43243 HERC1-205ENST00000559886 2462 ntTSL 1 (best)13.28□□□□□ -0.284e-6■■□□□ 11.8
MATR3P43243 HERC1-208ENST00000560462 647 ntTSL 26.62□□□□□ -1.354e-6■■□□□ 11.8
MATR3P43243 NUP214-224ENST00000530863 560 ntTSL 54.67□□□□□ -1.664e-6■■□□□ 11.8
MATR3P43243 HERC1-203ENST00000558532 581 ntTSL 33.36□□□□□ -1.874e-6■■□□□ 11.8
MATR3P43243 IPO11-210ENST00000507640 458 ntTSL 32.91□□□□□ -1.945e-6■■□□□ 11.8
MATR3P43243 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.293e-21■■□□□ 11.8
MATR3P43243 CCND2-201ENST00000261254 6480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.365e-7■■□□□ 11.8
MATR3P43243 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.523e-6■■□□□ 11.8
MATR3P43243 FNDC3B-209ENST00000478016 554 ntTSL 43.84□□□□□ -1.792e-6■■□□□ 11.8
MATR3P43243 ACSS3-206ENST00000549175 534 ntTSL 513.73□□□□□ -0.213e-15■■□□□ 11.8
MATR3P43243 SMC4-206ENST00000465903 849 ntTSL 328.31■■■□□ 2.127e-8■■□□□ 11.8
MATR3P43243 DMTF1-230ENST00000580710 635 ntTSL 527.22■■□□□ 1.957e-8■■□□□ 11.8
MATR3P43243 SMC4-221ENST00000489573 1553 ntTSL 1 (best)23.6■■□□□ 1.377e-8■■□□□ 11.8
MATR3P43243 SMC4-222ENST00000490207 821 ntTSL 521.62■■□□□ 1.057e-8■■□□□ 11.8
MATR3P43243 SMC4-209ENST00000468653 1756 ntTSL 220.66■□□□□ 0.97e-8■■□□□ 11.8
MATR3P43243 SMC4-211ENST00000469858 1971 ntTSL 219.73■□□□□ 0.757e-8■■□□□ 11.8
MATR3P43243 SMC4-216ENST00000485645 583 ntTSL 518.73■□□□□ 0.597e-8■■□□□ 11.8
MATR3P43243 SMC4-226ENST00000497311 708 ntTSL 518.73■□□□□ 0.597e-8■■□□□ 11.8
MATR3P43243 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.08■□□□□ 0.487e-8■■□□□ 11.8
MATR3P43243 DMTF1-226ENST00000579592 579 ntTSL 417.44■□□□□ 0.387e-8■■□□□ 11.8
MATR3P43243 DMTF1-237ENST00000584457 569 ntTSL 416.75■□□□□ 0.277e-8■■□□□ 11.8
MATR3P43243 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.037e-8■■□□□ 11.8
MATR3P43243 SMC4-210ENST00000469762 3998 ntTSL 2 BASIC11.43□□□□□ -0.587e-8■■□□□ 11.8
MATR3P43243 SMC4-213ENST00000472282 667 ntTSL 39.94□□□□□ -0.827e-8■■□□□ 11.8
MATR3P43243 SMC4-214ENST00000472991 582 ntTSL 59.94□□□□□ -0.827e-8■■□□□ 11.8
MATR3P43243 DMTF1-205ENST00000414630 627 ntTSL 59.28□□□□□ -0.927e-8■■□□□ 11.8
MATR3P43243 DMTF1-217ENST00000448598 572 ntTSL 47.51□□□□□ -1.217e-8■■□□□ 11.8
MATR3P43243 SMC4-217ENST00000485867 629 ntTSL 37□□□□□ -1.297e-8■■□□□ 11.8
MATR3P43243 DMTF1-210ENST00000428819 533 ntTSL 45.83□□□□□ -1.487e-8■■□□□ 11.8
MATR3P43243 DMTF1-207ENST00000423590 545 ntTSL 55.76□□□□□ -1.497e-8■■□□□ 11.8
MATR3P43243 DMTF1-212ENST00000432366 557 ntTSL 55.26□□□□□ -1.577e-8■■□□□ 11.8
MATR3P43243 SMC4-208ENST00000467468 566 ntTSL 44.14□□□□□ -1.757e-8■■□□□ 11.8
MATR3P43243 GBE1-203ENST00000484687 863 ntTSL 26.95□□□□□ -1.32e-6■■□□□ 11.8
MATR3P43243 AC119674.2-201ENST00000641494 879 ntAPPRIS ALT24.69□□□□□ -1.664e-13■■□□□ 11.8
MATR3P43243 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.22□□□□□ -1.415e-6■■□□□ 11.8
MATR3P43243 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.94□□□□□ -0.982e-6■■□□□ 11.7
MATR3P43243 COL27A1-207ENST00000494090 5329 ntTSL 1 (best)22.26■■□□□ 1.159e-7■■□□□ 11.7
MATR3P43243 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.939e-7■■□□□ 11.7
MATR3P43243 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)13.22□□□□□ -0.299e-7■■□□□ 11.7
MATR3P43243 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.955e-6■■□□□ 11.7
MATR3P43243 MICU3-204ENST00000519044 1130 ntAPPRIS ALT2 TSL 55.81□□□□□ -1.485e-6■■□□□ 11.7
MATR3P43243 EML4-205ENST00000409040 962 ntTSL 1 (best)18.46■□□□□ 0.559e-8■■□□□ 11.7
MATR3P43243 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.544e-6■■□□□ 11.7
MATR3P43243 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.594e-6■■□□□ 11.7
MATR3P43243 CDC42SE1-204ENST00000483763 2379 ntTSL 1 (best)9.54□□□□□ -0.884e-6■■□□□ 11.7
Retrieved 100 of 16,209 protein–RNA pairs in 563.7 ms