RNA–Protein interactions for RNA: ENST00000517339.5

PTK2B-210, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 2 BASIC

Gene PTK2B, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-210ENST00000517339 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
PTK2B-210ENST00000517339 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
PTK2B-210ENST00000517339 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.33
PTK2B-210ENST00000517339 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
PTK2B-210ENST00000517339 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
PTK2B-210ENST00000517339 EHMT2Q96KQ7 1210 aa16.32■□□□□ 0.2
PTK2B-210ENST00000517339 HRCP23327 699 aa16.26■□□□□ 0.19
PTK2B-210ENST00000517339 PPARGC1BQ86YN6 1023 aaKnown RBP16.09■□□□□ 0.17
PTK2B-210ENST00000517339 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
PTK2B-210ENST00000517339 CHIC1Q5VXU3 224 aa15.99■□□□□ 0.15
PTK2B-210ENST00000517339 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
PTK2B-210ENST00000517339 LOC105371045A0A1W2PR82 267 aa15.9■□□□□ 0.14
PTK2B-210ENST00000517339 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
PTK2B-210ENST00000517339 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.13
PTK2B-210ENST00000517339 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.13
PTK2B-210ENST00000517339 TRIM41Q8WV44 630 aa15.78■□□□□ 0.12
PTK2B-210ENST00000517339 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
PTK2B-210ENST00000517339 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.1
PTK2B-210ENST00000517339 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
PTK2B-210ENST00000517339 APLP2Q06481 763 aa15.42■□□□□ 0.06
PTK2B-210ENST00000517339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
PTK2B-210ENST00000517339 MYT1Q01538 1121 aa15.39■□□□□ 0.05
PTK2B-210ENST00000517339 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.05
PTK2B-210ENST00000517339 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
PTK2B-210ENST00000517339 MYO15BQ96JP2 1530 aa15.31■□□□□ 0.04
PTK2B-210ENST00000517339 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
PTK2B-210ENST00000517339 GTF3C3Q9Y5Q9 886 aa15.26■□□□□ 0.03
PTK2B-210ENST00000517339 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
PTK2B-210ENST00000517339 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
PTK2B-210ENST00000517339 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
PTK2B-210ENST00000517339 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
PTK2B-210ENST00000517339 NEUROD1Q13562 356 aa15.03■□□□□ -0
PTK2B-210ENST00000517339 ZCCHC6Q5VYS8 1495 aaKnown RBP14.99□□□□□ -0.01
PTK2B-210ENST00000517339 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
PTK2B-210ENST00000517339 NEFLP07196 543 aa14.93□□□□□ -0.02
PTK2B-210ENST00000517339 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
PTK2B-210ENST00000517339 ITGAEP38570 1179 aa14.88□□□□□ -0.03
PTK2B-210ENST00000517339 ATP1B4Q9UN42 357 aaPredicted RBP14.85□□□□□ -0.03
PTK2B-210ENST00000517339 CCDC180Q9P1Z9 1646 aa14.79□□□□□ -0.04
PTK2B-210ENST00000517339 ABCC9O60706 1549 aa14.76□□□□□ -0.05
PTK2B-210ENST00000517339 BCANQ96GW7 911 aa14.75□□□□□ -0.05
PTK2B-210ENST00000517339 MIER1Q8N108 512 aa14.66□□□□□ -0.06
PTK2B-210ENST00000517339 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
PTK2B-210ENST00000517339 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
PTK2B-210ENST00000517339 SCRIBQ14160 1630 aa14.5□□□□□ -0.09
PTK2B-210ENST00000517339 CNGB1Q14028 1251 aaPredicted RBP14.49□□□□□ -0.09
PTK2B-210ENST00000517339 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
PTK2B-210ENST00000517339 FKBP8Q14318 412 aa14.44□□□□□ -0.1
PTK2B-210ENST00000517339 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
PTK2B-210ENST00000517339 POLR3GLQ9BT43 218 aa14.4□□□□□ -0.1
PTK2B-210ENST00000517339 ANP32CO43423 234 aa14.39□□□□□ -0.11
PTK2B-210ENST00000517339 CLSPNQ9HAW4 1339 aa14.38□□□□□ -0.11
PTK2B-210ENST00000517339 CEP162Q5TB80 1403 aa14.36□□□□□ -0.11
PTK2B-210ENST00000517339 DDX10Q13206 875 aaKnown RBP14.35□□□□□ -0.11
PTK2B-210ENST00000517339 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
PTK2B-210ENST00000517339 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
PTK2B-210ENST00000517339 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
PTK2B-210ENST00000517339 RTL5Q5HYW3 569 aaPredicted RBP14.26□□□□□ -0.13
PTK2B-210ENST00000517339 ANP32EQ9BTT0 268 aa14.25□□□□□ -0.13
PTK2B-210ENST00000517339 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
PTK2B-210ENST00000517339 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
PTK2B-210ENST00000517339 CLIP1P30622 1438 aa14.22□□□□□ -0.13
PTK2B-210ENST00000517339 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
PTK2B-210ENST00000517339 TNIKQ9UKE5 1360 aa14.21□□□□□ -0.14
PTK2B-210ENST00000517339 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTK2B-210ENST00000517339 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
PTK2B-210ENST00000517339 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
PTK2B-210ENST00000517339 DAXXQ9UER7 740 aaPredicted RBP14.16□□□□□ -0.14
PTK2B-210ENST00000517339 SOGA1O94964 1423 aa14.13□□□□□ -0.15
PTK2B-210ENST00000517339 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
PTK2B-210ENST00000517339 EEA1Q15075 1411 aa14.09□□□□□ -0.15
PTK2B-210ENST00000517339 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
PTK2B-210ENST00000517339 TSHZ2Q9NRE2 1034 aa14.07□□□□□ -0.16
PTK2B-210ENST00000517339 ZNF326Q5BKZ1 582 aaKnown RBP14.06□□□□□ -0.16
PTK2B-210ENST00000517339 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
PTK2B-210ENST00000517339 BCL11AQ9H165 835 aa14.05□□□□□ -0.16
PTK2B-210ENST00000517339 NBR1Q14596 966 aa14.04□□□□□ -0.16
PTK2B-210ENST00000517339 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
PTK2B-210ENST00000517339 ANP32AP39687 249 aaKnown RBP14.01□□□□□ -0.17
PTK2B-210ENST00000517339 WRNQ14191 1432 aaPredicted RBP eCLIP14.01□□□□□ -0.17
PTK2B-210ENST00000517339 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
PTK2B-210ENST00000517339 NPM2Q86SE8 214 aaKnown RBP14.01□□□□□ -0.17
PTK2B-210ENST00000517339 SIN3AQ96ST3 1273 aa14□□□□□ -0.17
PTK2B-210ENST00000517339 ABCC8Q09428 1581 aa14□□□□□ -0.17
PTK2B-210ENST00000517339 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
PTK2B-210ENST00000517339 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
PTK2B-210ENST00000517339 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
PTK2B-210ENST00000517339 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
PTK2B-210ENST00000517339 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
PTK2B-210ENST00000517339 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
PTK2B-210ENST00000517339 CCDC136Q96JN2 1154 aa13.91□□□□□ -0.18
PTK2B-210ENST00000517339 CHIC2Q9UKJ5 165 aa13.9□□□□□ -0.18
PTK2B-210ENST00000517339 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
PTK2B-210ENST00000517339 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
PTK2B-210ENST00000517339 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
PTK2B-210ENST00000517339 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
PTK2B-210ENST00000517339 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
PTK2B-210ENST00000517339 CCNB3Q8WWL7 1395 aa13.85□□□□□ -0.19
PTK2B-210ENST00000517339 BAZ1AQ9NRL2 1556 aaPredicted RBP13.85□□□□□ -0.19
PTK2B-210ENST00000517339 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms