RNA–Protein interactions for RNA: ENST00000586919.5

NFIC-204, Transcript of nuclear factor I C, humanhuman

TSL 5 BASIC

Gene NFIC, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-204ENST00000586919 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
NFIC-204ENST00000586919 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
NFIC-204ENST00000586919 ABCC9O60706 1549 aa31.09■■■□□ 2.57
NFIC-204ENST00000586919 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.33
NFIC-204ENST00000586919 NACADO15069 1562 aa29.46■■■□□ 2.31
NFIC-204ENST00000586919 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
NFIC-204ENST00000586919 DNAJC5BQ9UF47 199 aa29.25■■■□□ 2.27
NFIC-204ENST00000586919 ZCCHC6Q5VYS8 1495 aaKnown RBP29.23■■■□□ 2.27
NFIC-204ENST00000586919 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.25
NFIC-204ENST00000586919 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
NFIC-204ENST00000586919 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.23
NFIC-204ENST00000586919 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
NFIC-204ENST00000586919 BICRAQ9NZM4 1560 aa28.69■■■□□ 2.18
NFIC-204ENST00000586919 SHROOM4Q9ULL8 1493 aa28.47■■■□□ 2.15
NFIC-204ENST00000586919 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
NFIC-204ENST00000586919 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
NFIC-204ENST00000586919 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
NFIC-204ENST00000586919 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
NFIC-204ENST00000586919 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
NFIC-204ENST00000586919 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
NFIC-204ENST00000586919 BAZ1AQ9NRL2 1556 aaPredicted RBP27.16■■□□□ 1.94
NFIC-204ENST00000586919 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
NFIC-204ENST00000586919 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
NFIC-204ENST00000586919 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
NFIC-204ENST00000586919 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
NFIC-204ENST00000586919 MROH2BQ7Z745 1585 aa26.95■■□□□ 1.9
NFIC-204ENST00000586919 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
NFIC-204ENST00000586919 CUX2O14529 1486 aa26.9■■□□□ 1.9
NFIC-204ENST00000586919 ERCC6Q03468 1493 aa26.9■■□□□ 1.9
NFIC-204ENST00000586919 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
NFIC-204ENST00000586919 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
NFIC-204ENST00000586919 WIZO95785 1651 aa26.67■■□□□ 1.86
NFIC-204ENST00000586919 NESP48681 1621 aa26.67■■□□□ 1.86
NFIC-204ENST00000586919 LAMC3Q9Y6N6 1575 aa26.56■■□□□ 1.84
NFIC-204ENST00000586919 PDS5BQ9NTI5 1447 aa26.5■■□□□ 1.83
NFIC-204ENST00000586919 TOP2AP11388 1531 aaKnown RBP26.45■■□□□ 1.83
NFIC-204ENST00000586919 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
NFIC-204ENST00000586919 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
NFIC-204ENST00000586919 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
NFIC-204ENST00000586919 MRC2Q9UBG0 1479 aa26.18■■□□□ 1.78
NFIC-204ENST00000586919 WDR62O43379 1518 aa26.09■■□□□ 1.77
NFIC-204ENST00000586919 CFTRP13569 1480 aa26.08■■□□□ 1.77
NFIC-204ENST00000586919 CEP164Q9UPV0 1460 aa26.08■■□□□ 1.77
NFIC-204ENST00000586919 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
NFIC-204ENST00000586919 FANCD2Q9BXW9 1451 aa26.05■■□□□ 1.76
NFIC-204ENST00000586919 SUPT5HO00267 1087 aaKnown RBP26.02■■□□□ 1.76
NFIC-204ENST00000586919 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
NFIC-204ENST00000586919 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
NFIC-204ENST00000586919 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
NFIC-204ENST00000586919 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
NFIC-204ENST00000586919 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
NFIC-204ENST00000586919 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
NFIC-204ENST00000586919 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
NFIC-204ENST00000586919 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
NFIC-204ENST00000586919 DNMBPQ6XZF7 1577 aa25.46■■□□□ 1.67
NFIC-204ENST00000586919 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.645e-7■■■■■ 31.5
NFIC-204ENST00000586919 CUX1P39880 1505 aa25.28■■□□□ 1.64
NFIC-204ENST00000586919 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
NFIC-204ENST00000586919 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
NFIC-204ENST00000586919 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
NFIC-204ENST00000586919 SOGA1O94964 1423 aa25.24■■□□□ 1.63
NFIC-204ENST00000586919 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
NFIC-204ENST00000586919 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
NFIC-204ENST00000586919 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
NFIC-204ENST00000586919 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
NFIC-204ENST00000586919 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.621e-7■■■■■ 38.5
NFIC-204ENST00000586919 FBLN2P98095 1184 aa25.18■■□□□ 1.62
NFIC-204ENST00000586919 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
NFIC-204ENST00000586919 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
NFIC-204ENST00000586919 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
NFIC-204ENST00000586919 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
NFIC-204ENST00000586919 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
NFIC-204ENST00000586919 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
NFIC-204ENST00000586919 CYB5RLQ6IPT4 315 aa25.1■■□□□ 1.61
NFIC-204ENST00000586919 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
NFIC-204ENST00000586919 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
NFIC-204ENST00000586919 CHD1O14646 1710 aa25.01■■□□□ 1.59
NFIC-204ENST00000586919 GRIN2BQ13224 1484 aa25■■□□□ 1.59
NFIC-204ENST00000586919 MAGI1Q96QZ7 1491 aaPredicted RBP25■■□□□ 1.59
NFIC-204ENST00000586919 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
NFIC-204ENST00000586919 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
NFIC-204ENST00000586919 ARAP1Q96P48 1450 aa24.91■■□□□ 1.58
NFIC-204ENST00000586919 SYNJ2O15056 1496 aa24.9■■□□□ 1.58
NFIC-204ENST00000586919 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
NFIC-204ENST00000586919 ABCA5Q8WWZ7 1642 aa24.89■■□□□ 1.57
NFIC-204ENST00000586919 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
NFIC-204ENST00000586919 PBRM1Q86U86 1689 aa24.83■■□□□ 1.57
NFIC-204ENST00000586919 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
NFIC-204ENST00000586919 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
NFIC-204ENST00000586919 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
NFIC-204ENST00000586919 GRIN2AQ12879 1464 aa24.64■■□□□ 1.53
NFIC-204ENST00000586919 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
NFIC-204ENST00000586919 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
NFIC-204ENST00000586919 NUP160Q12769 1436 aa24.58■■□□□ 1.53
NFIC-204ENST00000586919 CUL7Q14999 1698 aa24.53■■□□□ 1.52
NFIC-204ENST00000586919 IGF1RP08069 1367 aa24.49■■□□□ 1.51
NFIC-204ENST00000586919 CEP170Q5SW79 1584 aa24.47■■□□□ 1.51
NFIC-204ENST00000586919 JPH4Q96JJ6 628 aa24.42■■□□□ 1.5
NFIC-204ENST00000586919 ERCC6L2Q5T890 1561 aa24.4■■□□□ 1.5
NFIC-204ENST00000586919 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms