RNA–Protein interactions for RNA: ENST00000397501.5

PTK2B-203, Transcript of protein tyrosine kinase 2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTK2B, Length 4,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-203ENST00000397501 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.17
PTK2B-203ENST00000397501 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
PTK2B-203ENST00000397501 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
PTK2B-203ENST00000397501 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
PTK2B-203ENST00000397501 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
PTK2B-203ENST00000397501 ZCCHC6Q5VYS8 1495 aaKnown RBP18.7■□□□□ 0.58
PTK2B-203ENST00000397501 ABCC9O60706 1549 aa18.7■□□□□ 0.58
PTK2B-203ENST00000397501 DCAF1Q9Y4B6 1507 aa18.24■□□□□ 0.51
PTK2B-203ENST00000397501 PELP1Q8IZL8 1130 aaKnown RBP18.23■□□□□ 0.51
PTK2B-203ENST00000397501 NACADO15069 1562 aa18.12■□□□□ 0.49
PTK2B-203ENST00000397501 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
PTK2B-203ENST00000397501 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
PTK2B-203ENST00000397501 TRIM41Q8WV44 630 aa18■□□□□ 0.47
PTK2B-203ENST00000397501 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTK2B-203ENST00000397501 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
PTK2B-203ENST00000397501 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
PTK2B-203ENST00000397501 APLP2Q06481 763 aa17.85■□□□□ 0.45
PTK2B-203ENST00000397501 FAM9AQ8IZU1 332 aaPredicted RBP17.84■□□□□ 0.45
PTK2B-203ENST00000397501 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.45
PTK2B-203ENST00000397501 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
PTK2B-203ENST00000397501 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
PTK2B-203ENST00000397501 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
PTK2B-203ENST00000397501 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
PTK2B-203ENST00000397501 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
PTK2B-203ENST00000397501 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
PTK2B-203ENST00000397501 CCER1Q8TC90 406 aaPredicted RBP17.4■□□□□ 0.38
PTK2B-203ENST00000397501 CECR2Q9BXF3 1484 aa17.38■□□□□ 0.37
PTK2B-203ENST00000397501 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
PTK2B-203ENST00000397501 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
PTK2B-203ENST00000397501 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
PTK2B-203ENST00000397501 MROH2BQ7Z745 1585 aa17.26■□□□□ 0.35
PTK2B-203ENST00000397501 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
PTK2B-203ENST00000397501 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
PTK2B-203ENST00000397501 MYT1Q01538 1121 aa17.14■□□□□ 0.33
PTK2B-203ENST00000397501 NEFLP07196 543 aa17.11■□□□□ 0.33
PTK2B-203ENST00000397501 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
PTK2B-203ENST00000397501 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
PTK2B-203ENST00000397501 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
PTK2B-203ENST00000397501 WIZO95785 1651 aa17.05■□□□□ 0.32
PTK2B-203ENST00000397501 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
PTK2B-203ENST00000397501 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
PTK2B-203ENST00000397501 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
PTK2B-203ENST00000397501 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
PTK2B-203ENST00000397501 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
PTK2B-203ENST00000397501 EEA1Q15075 1411 aa16.92■□□□□ 0.3
PTK2B-203ENST00000397501 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
PTK2B-203ENST00000397501 PPARGC1BQ86YN6 1023 aaKnown RBP16.91■□□□□ 0.3
PTK2B-203ENST00000397501 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
PTK2B-203ENST00000397501 BICRAQ9NZM4 1560 aa16.76■□□□□ 0.27
PTK2B-203ENST00000397501 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
PTK2B-203ENST00000397501 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
PTK2B-203ENST00000397501 HRCP23327 699 aa16.7■□□□□ 0.26
PTK2B-203ENST00000397501 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
PTK2B-203ENST00000397501 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
PTK2B-203ENST00000397501 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
PTK2B-203ENST00000397501 KIF27Q86VH2 1401 aa16.68■□□□□ 0.26
PTK2B-203ENST00000397501 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
PTK2B-203ENST00000397501 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
PTK2B-203ENST00000397501 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
PTK2B-203ENST00000397501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
PTK2B-203ENST00000397501 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
PTK2B-203ENST00000397501 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
PTK2B-203ENST00000397501 SOGA1O94964 1423 aa16.57■□□□□ 0.24
PTK2B-203ENST00000397501 CLIP1P30622 1438 aa16.57■□□□□ 0.24
PTK2B-203ENST00000397501 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
PTK2B-203ENST00000397501 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
PTK2B-203ENST00000397501 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
PTK2B-203ENST00000397501 FBLN2P98095 1184 aa16.54■□□□□ 0.24
PTK2B-203ENST00000397501 ITGAEP38570 1179 aa16.53■□□□□ 0.24
PTK2B-203ENST00000397501 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
PTK2B-203ENST00000397501 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
PTK2B-203ENST00000397501 CUX2O14529 1486 aa16.48■□□□□ 0.23
PTK2B-203ENST00000397501 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
PTK2B-203ENST00000397501 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
PTK2B-203ENST00000397501 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
PTK2B-203ENST00000397501 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
PTK2B-203ENST00000397501 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
PTK2B-203ENST00000397501 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
PTK2B-203ENST00000397501 CFTRP13569 1480 aa16.38■□□□□ 0.21
PTK2B-203ENST00000397501 MYT1LQ9UL68 1186 aa16.36■□□□□ 0.21
PTK2B-203ENST00000397501 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
PTK2B-203ENST00000397501 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
PTK2B-203ENST00000397501 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
PTK2B-203ENST00000397501 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
PTK2B-203ENST00000397501 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
PTK2B-203ENST00000397501 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
PTK2B-203ENST00000397501 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
PTK2B-203ENST00000397501 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
PTK2B-203ENST00000397501 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
PTK2B-203ENST00000397501 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
PTK2B-203ENST00000397501 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
PTK2B-203ENST00000397501 TDRD9Q8NDG6 1382 aaKnown RBP16.22■□□□□ 0.19
PTK2B-203ENST00000397501 MTUS2Q5JR59 1369 aa16.21■□□□□ 0.19
PTK2B-203ENST00000397501 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
PTK2B-203ENST00000397501 CLSPNQ9HAW4 1339 aa16.2■□□□□ 0.18
PTK2B-203ENST00000397501 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
PTK2B-203ENST00000397501 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
PTK2B-203ENST00000397501 TRIM52Q96A61 297 aa16.13■□□□□ 0.17
PTK2B-203ENST00000397501 CUX1P39880 1505 aa16.12■□□□□ 0.17
PTK2B-203ENST00000397501 KIF21BO75037 1637 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms