RNA–Protein interactions for RNA: ENST00000484687.1

GBE1-203, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 2

Gene GBE1, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-203ENST00000484687 AEBP2Q6ZN18 517 aaPredicted RBP30.73■■■□□ 2.51
GBE1-203ENST00000484687 CHIC1Q5VXU3 224 aa29.44■■■□□ 2.3
GBE1-203ENST00000484687 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
GBE1-203ENST00000484687 PHF23Q9BUL5 403 aaPredicted RBP25.9■■□□□ 1.74
GBE1-203ENST00000484687 FOXD1Q16676 465 aa24.29■■□□□ 1.48
GBE1-203ENST00000484687 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
GBE1-203ENST00000484687 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
GBE1-203ENST00000484687 ADRA2BP18089 450 aa22.9■■□□□ 1.26
GBE1-203ENST00000484687 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
GBE1-203ENST00000484687 MSH5O43196 834 aa22.51■■□□□ 1.19
GBE1-203ENST00000484687 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
GBE1-203ENST00000484687 MAPK8IP2Q13387 824 aaPredicted RBP20.95■□□□□ 0.94
GBE1-203ENST00000484687 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
GBE1-203ENST00000484687 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
GBE1-203ENST00000484687 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
GBE1-203ENST00000484687 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
GBE1-203ENST00000484687 HOXD11P31277 338 aaPredicted RBP20.14■□□□□ 0.81
GBE1-203ENST00000484687 RNF216Q9NWF9 866 aaPredicted RBP20.03■□□□□ 0.8
GBE1-203ENST00000484687 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
GBE1-203ENST00000484687 NPM3O75607 178 aaKnown RBP19.81■□□□□ 0.76
GBE1-203ENST00000484687 KCNA4P22459 653 aa19.73■□□□□ 0.75
GBE1-203ENST00000484687 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
GBE1-203ENST00000484687 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
GBE1-203ENST00000484687 RNF39Q9H2S5 420 aa19.33■□□□□ 0.68
GBE1-203ENST00000484687 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
GBE1-203ENST00000484687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.641e-7■□□□□ 10.1
GBE1-203ENST00000484687 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
GBE1-203ENST00000484687 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
GBE1-203ENST00000484687 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
GBE1-203ENST00000484687 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
GBE1-203ENST00000484687 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
GBE1-203ENST00000484687 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
GBE1-203ENST00000484687 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
GBE1-203ENST00000484687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
GBE1-203ENST00000484687 CAPN15O75808 1086 aa18.26■□□□□ 0.51
GBE1-203ENST00000484687 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
GBE1-203ENST00000484687 FOXD4L1Q9NU39 408 aa18.26■□□□□ 0.51
GBE1-203ENST00000484687 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
GBE1-203ENST00000484687 ZBTB22O15209 634 aa18.22■□□□□ 0.51
GBE1-203ENST00000484687 DSG3P32926 999 aa18.2■□□□□ 0.5
GBE1-203ENST00000484687 SAMD1Q6SPF0 538 aaPredicted RBP18.2■□□□□ 0.5
GBE1-203ENST00000484687 APLP2Q06481 763 aa18.14■□□□□ 0.49
GBE1-203ENST00000484687 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
GBE1-203ENST00000484687 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
GBE1-203ENST00000484687 ABCB7O75027 752 aa17.91■□□□□ 0.46
GBE1-203ENST00000484687 ATF5Q9Y2D1 282 aaPredicted RBP17.91■□□□□ 0.46
GBE1-203ENST00000484687 POLA2Q14181 598 aa17.7■□□□□ 0.42
GBE1-203ENST00000484687 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
GBE1-203ENST00000484687 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
GBE1-203ENST00000484687 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
GBE1-203ENST00000484687 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
GBE1-203ENST00000484687 MKRN4PQ13434 485 aaPredicted RBP17.11■□□□□ 0.33
GBE1-203ENST00000484687 FBLN2P98095 1184 aa17.01■□□□□ 0.31
GBE1-203ENST00000484687 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
GBE1-203ENST00000484687 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
GBE1-203ENST00000484687 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
GBE1-203ENST00000484687 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
GBE1-203ENST00000484687 POTEHQ6S545 545 aa16.86■□□□□ 0.29
GBE1-203ENST00000484687 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
GBE1-203ENST00000484687 CHRDL2Q6WN34 429 aa16.79■□□□□ 0.28
GBE1-203ENST00000484687 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
GBE1-203ENST00000484687 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
GBE1-203ENST00000484687 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
GBE1-203ENST00000484687 FKBP8Q14318 412 aa16.64■□□□□ 0.25
GBE1-203ENST00000484687 PIP4P2Q8N4L2 257 aa16.5■□□□□ 0.23
GBE1-203ENST00000484687 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
GBE1-203ENST00000484687 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
GBE1-203ENST00000484687 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
GBE1-203ENST00000484687 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
GBE1-203ENST00000484687 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
GBE1-203ENST00000484687 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
GBE1-203ENST00000484687 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
GBE1-203ENST00000484687 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
GBE1-203ENST00000484687 PROM2Q8N271 834 aa16.17■□□□□ 0.18
GBE1-203ENST00000484687 PRR29P0C7W0 189 aa16.15■□□□□ 0.18
GBE1-203ENST00000484687 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
GBE1-203ENST00000484687 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
GBE1-203ENST00000484687 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
GBE1-203ENST00000484687 HAX1O00165 279 aa16.01■□□□□ 0.15
GBE1-203ENST00000484687 EVX2Q03828 476 aa15.99■□□□□ 0.15
GBE1-203ENST00000484687 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
GBE1-203ENST00000484687 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
GBE1-203ENST00000484687 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
GBE1-203ENST00000484687 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
GBE1-203ENST00000484687 FARP1Q9Y4F1 1045 aaPredicted RBP15.9■□□□□ 0.14
GBE1-203ENST00000484687 MNX1P50219 401 aaPredicted RBP15.79■□□□□ 0.12
GBE1-203ENST00000484687 CD44P16070 742 aaKnown RBP15.68■□□□□ 0.1
GBE1-203ENST00000484687 VASPP50552 380 aaPredicted RBP15.67■□□□□ 0.1
GBE1-203ENST00000484687 GABBR2O75899 941 aa15.58■□□□□ 0.08
GBE1-203ENST00000484687 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
GBE1-203ENST00000484687 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
GBE1-203ENST00000484687 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
GBE1-203ENST00000484687 MIER1Q8N108 512 aa15.51■□□□□ 0.07
GBE1-203ENST00000484687 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
GBE1-203ENST00000484687 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
GBE1-203ENST00000484687 CLCN6P51797 869 aa15.4■□□□□ 0.06
GBE1-203ENST00000484687 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
GBE1-203ENST00000484687 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
GBE1-203ENST00000484687 PHF12Q96QT6 1004 aa15.37■□□□□ 0.05
GBE1-203ENST00000484687 PAK3O75914 559 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms