RNA–Protein interactions for RNA: ENST00000420218.3

PTK2B-205, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 5 BASIC

Gene PTK2B, Length 3,941 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-205ENST00000420218 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
PTK2B-205ENST00000420218 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
PTK2B-205ENST00000420218 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
PTK2B-205ENST00000420218 DCAF8L2P0C7V8 631 aa15.41■□□□□ 0.06
PTK2B-205ENST00000420218 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
PTK2B-205ENST00000420218 HRCP23327 699 aa14.93□□□□□ -0.02
PTK2B-205ENST00000420218 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
PTK2B-205ENST00000420218 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
PTK2B-205ENST00000420218 CHIC1Q5VXU3 224 aa14.62□□□□□ -0.07
PTK2B-205ENST00000420218 LOC105371045A0A1W2PR82 267 aa14.61□□□□□ -0.07
PTK2B-205ENST00000420218 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
PTK2B-205ENST00000420218 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
PTK2B-205ENST00000420218 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
PTK2B-205ENST00000420218 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
PTK2B-205ENST00000420218 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
PTK2B-205ENST00000420218 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
PTK2B-205ENST00000420218 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
PTK2B-205ENST00000420218 TRIM41Q8WV44 630 aa14.26□□□□□ -0.13
PTK2B-205ENST00000420218 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
PTK2B-205ENST00000420218 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
PTK2B-205ENST00000420218 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
PTK2B-205ENST00000420218 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
PTK2B-205ENST00000420218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.09□□□□□ -0.15
PTK2B-205ENST00000420218 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
PTK2B-205ENST00000420218 ABCC9O60706 1549 aa14.04□□□□□ -0.16
PTK2B-205ENST00000420218 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
PTK2B-205ENST00000420218 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
PTK2B-205ENST00000420218 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
PTK2B-205ENST00000420218 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
PTK2B-205ENST00000420218 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
PTK2B-205ENST00000420218 MYT1Q01538 1121 aa13.88□□□□□ -0.19
PTK2B-205ENST00000420218 NEUROD1Q13562 356 aa13.87□□□□□ -0.19
PTK2B-205ENST00000420218 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
PTK2B-205ENST00000420218 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
PTK2B-205ENST00000420218 APLP2Q06481 763 aa13.76□□□□□ -0.21
PTK2B-205ENST00000420218 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
PTK2B-205ENST00000420218 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTK2B-205ENST00000420218 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
PTK2B-205ENST00000420218 ZNF316A6NFI3 1004 aaPredicted RBP13.57□□□□□ -0.24
PTK2B-205ENST00000420218 CECR2Q9BXF3 1484 aa13.54□□□□□ -0.24
PTK2B-205ENST00000420218 BCANQ96GW7 911 aa13.48□□□□□ -0.25
PTK2B-205ENST00000420218 ITGAEP38570 1179 aa13.47□□□□□ -0.25
PTK2B-205ENST00000420218 MIER1Q8N108 512 aa13.46□□□□□ -0.25
PTK2B-205ENST00000420218 RB1CC1Q8TDY2 1594 aa13.46□□□□□ -0.25
PTK2B-205ENST00000420218 NACADO15069 1562 aa13.43□□□□□ -0.26
PTK2B-205ENST00000420218 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
PTK2B-205ENST00000420218 NEFLP07196 543 aa13.39□□□□□ -0.27
PTK2B-205ENST00000420218 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
PTK2B-205ENST00000420218 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
PTK2B-205ENST00000420218 WIZO95785 1651 aa13.29□□□□□ -0.28
PTK2B-205ENST00000420218 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
PTK2B-205ENST00000420218 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
PTK2B-205ENST00000420218 FKBP8Q14318 412 aa13.17□□□□□ -0.3
PTK2B-205ENST00000420218 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
PTK2B-205ENST00000420218 ABCC8Q09428 1581 aa13.15□□□□□ -0.31
PTK2B-205ENST00000420218 CCDC88BA6NC98 1476 aa13.1□□□□□ -0.31
PTK2B-205ENST00000420218 SUPT16HQ9Y5B9 1047 aaKnown RBP13.1□□□□□ -0.31
PTK2B-205ENST00000420218 SOGA1O94964 1423 aa13.08□□□□□ -0.32
PTK2B-205ENST00000420218 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
PTK2B-205ENST00000420218 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
PTK2B-205ENST00000420218 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
PTK2B-205ENST00000420218 ANP32EQ9BTT0 268 aa13.06□□□□□ -0.32
PTK2B-205ENST00000420218 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
PTK2B-205ENST00000420218 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
PTK2B-205ENST00000420218 SMARCA4P51532 1647 aa13□□□□□ -0.33
PTK2B-205ENST00000420218 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
PTK2B-205ENST00000420218 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
PTK2B-205ENST00000420218 ANP32CO43423 234 aa12.98□□□□□ -0.33
PTK2B-205ENST00000420218 IRX6P78412 446 aaPredicted RBP12.98□□□□□ -0.33
PTK2B-205ENST00000420218 BCL11AQ9H165 835 aa12.97□□□□□ -0.33
PTK2B-205ENST00000420218 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
PTK2B-205ENST00000420218 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
PTK2B-205ENST00000420218 RUSC2Q8N2Y8 1516 aa12.95□□□□□ -0.34
PTK2B-205ENST00000420218 CDK11AQ9UQ88 783 aaPredicted RBP12.95□□□□□ -0.34
PTK2B-205ENST00000420218 BAZ1BQ9UIG0 1483 aaKnown RBP12.95□□□□□ -0.34
PTK2B-205ENST00000420218 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
PTK2B-205ENST00000420218 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
PTK2B-205ENST00000420218 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
PTK2B-205ENST00000420218 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
PTK2B-205ENST00000420218 CLIP1P30622 1438 aa12.87□□□□□ -0.35
PTK2B-205ENST00000420218 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTK2B-205ENST00000420218 P3H3Q8IVL6 736 aa12.87□□□□□ -0.35
PTK2B-205ENST00000420218 GOLGA3Q08378 1498 aa12.86□□□□□ -0.35
PTK2B-205ENST00000420218 EEA1Q15075 1411 aa12.83□□□□□ -0.36
PTK2B-205ENST00000420218 NBR1Q14596 966 aa12.82□□□□□ -0.36
PTK2B-205ENST00000420218 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
PTK2B-205ENST00000420218 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
PTK2B-205ENST00000420218 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
PTK2B-205ENST00000420218 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
PTK2B-205ENST00000420218 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
PTK2B-205ENST00000420218 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.37
PTK2B-205ENST00000420218 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
PTK2B-205ENST00000420218 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
PTK2B-205ENST00000420218 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
PTK2B-205ENST00000420218 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
PTK2B-205ENST00000420218 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
PTK2B-205ENST00000420218 RAPGEF2Q9Y4G8 1499 aa12.71□□□□□ -0.37
PTK2B-205ENST00000420218 ZNF326Q5BKZ1 582 aaKnown RBP12.68□□□□□ -0.38
PTK2B-205ENST00000420218 SYNJ1O43426 1573 aa12.67□□□□□ -0.38
PTK2B-205ENST00000420218 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms