RNA–Protein interactions for RNA: ENST00000395111.7

NFIC-202, Transcript of nuclear factor I C, humanhuman

TSL 2 BASIC

Gene NFIC, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-202ENST00000395111 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
NFIC-202ENST00000395111 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
NFIC-202ENST00000395111 ABCC9O60706 1549 aa31.08■■■□□ 2.57
NFIC-202ENST00000395111 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
NFIC-202ENST00000395111 ZCCHC6Q5VYS8 1495 aaKnown RBP30.78■■■□□ 2.52
NFIC-202ENST00000395111 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
NFIC-202ENST00000395111 NACADO15069 1562 aa30.13■■■□□ 2.41
NFIC-202ENST00000395111 MYO15BQ96JP2 1530 aa30.07■■■□□ 2.4
NFIC-202ENST00000395111 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
NFIC-202ENST00000395111 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
NFIC-202ENST00000395111 SCRIBQ14160 1630 aa29.72■■■□□ 2.35
NFIC-202ENST00000395111 UNC13AQ9UPW8 1703 aa29.36■■■□□ 2.29
NFIC-202ENST00000395111 PABPN1Q86U42 306 aaKnown RBP eCLIP29.29■■■□□ 2.28
NFIC-202ENST00000395111 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
NFIC-202ENST00000395111 CECR2Q9BXF3 1484 aa28.69■■■□□ 2.18
NFIC-202ENST00000395111 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
NFIC-202ENST00000395111 MROH2BQ7Z745 1585 aa28.44■■■□□ 2.14
NFIC-202ENST00000395111 BAZ1AQ9NRL2 1556 aaPredicted RBP28.42■■■□□ 2.14
NFIC-202ENST00000395111 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.13
NFIC-202ENST00000395111 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
NFIC-202ENST00000395111 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
NFIC-202ENST00000395111 WIZO95785 1651 aa28.19■■■□□ 2.1
NFIC-202ENST00000395111 ATAD2BQ9ULI0 1458 aa28.04■■■□□ 2.08
NFIC-202ENST00000395111 CC2D2AQ9P2K1 1620 aa28.03■■■□□ 2.08
NFIC-202ENST00000395111 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
NFIC-202ENST00000395111 PEG3Q9GZU2 1588 aa27.95■■■□□ 2.06
NFIC-202ENST00000395111 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.05
NFIC-202ENST00000395111 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
NFIC-202ENST00000395111 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
NFIC-202ENST00000395111 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
NFIC-202ENST00000395111 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
NFIC-202ENST00000395111 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
NFIC-202ENST00000395111 CADPSQ9ULU8 1353 aa27.14■■□□□ 1.94
NFIC-202ENST00000395111 NESP48681 1621 aa27.13■■□□□ 1.93
NFIC-202ENST00000395111 CFTRP13569 1480 aa27.1■■□□□ 1.93
NFIC-202ENST00000395111 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
NFIC-202ENST00000395111 LAMC3Q9Y6N6 1575 aa26.95■■□□□ 1.91
NFIC-202ENST00000395111 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
NFIC-202ENST00000395111 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
NFIC-202ENST00000395111 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
NFIC-202ENST00000395111 PDS5BQ9NTI5 1447 aa26.82■■□□□ 1.88
NFIC-202ENST00000395111 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
NFIC-202ENST00000395111 WRNQ14191 1432 aaPredicted RBP eCLIP26.76■■□□□ 1.871e-7■■■■■ 38.5
NFIC-202ENST00000395111 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
NFIC-202ENST00000395111 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
NFIC-202ENST00000395111 ERCC6Q03468 1493 aa26.7■■□□□ 1.86
NFIC-202ENST00000395111 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
NFIC-202ENST00000395111 CUX1P39880 1505 aa26.62■■□□□ 1.85
NFIC-202ENST00000395111 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
NFIC-202ENST00000395111 TOP2BQ02880 1626 aa26.52■■□□□ 1.84
NFIC-202ENST00000395111 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
NFIC-202ENST00000395111 TOPBP1Q92547 1522 aa26.5■■□□□ 1.83
NFIC-202ENST00000395111 DNMBPQ6XZF7 1577 aa26.48■■□□□ 1.83
NFIC-202ENST00000395111 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
NFIC-202ENST00000395111 FAM9AQ8IZU1 332 aaPredicted RBP26.43■■□□□ 1.82
NFIC-202ENST00000395111 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
NFIC-202ENST00000395111 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
NFIC-202ENST00000395111 WDR62O43379 1518 aa26.34■■□□□ 1.81
NFIC-202ENST00000395111 POLA1P09884 1462 aaPredicted RBP26.34■■□□□ 1.81
NFIC-202ENST00000395111 SOGA1O94964 1423 aa26.32■■□□□ 1.8
NFIC-202ENST00000395111 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
NFIC-202ENST00000395111 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
NFIC-202ENST00000395111 CUX2O14529 1486 aa26.19■■□□□ 1.78
NFIC-202ENST00000395111 EHMT2Q96KQ7 1210 aa26.18■■□□□ 1.78
NFIC-202ENST00000395111 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
NFIC-202ENST00000395111 KIF27Q86VH2 1401 aa26.11■■□□□ 1.77
NFIC-202ENST00000395111 ABCA10Q8WWZ4 1543 aa26.11■■□□□ 1.77
NFIC-202ENST00000395111 IFT140Q96RY7 1462 aa26.09■■□□□ 1.77
NFIC-202ENST00000395111 TARBP1Q13395 1621 aaKnown RBP26.09■■□□□ 1.77
NFIC-202ENST00000395111 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
NFIC-202ENST00000395111 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
NFIC-202ENST00000395111 EEA1Q15075 1411 aa26.04■■□□□ 1.76
NFIC-202ENST00000395111 WDR97A6NE52 1622 aa26.03■■□□□ 1.76
NFIC-202ENST00000395111 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
NFIC-202ENST00000395111 AQRO60306 1485 aaKnown RBP eCLIP26.02■■□□□ 1.764e-7■■■■■ 30.6
NFIC-202ENST00000395111 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
NFIC-202ENST00000395111 IGF1RP08069 1367 aa25.93■■□□□ 1.74
NFIC-202ENST00000395111 ABCA5Q8WWZ7 1642 aa25.93■■□□□ 1.74
NFIC-202ENST00000395111 EIF4G3O43432 1585 aaKnown RBP25.88■■□□□ 1.73
NFIC-202ENST00000395111 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
NFIC-202ENST00000395111 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
NFIC-202ENST00000395111 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
NFIC-202ENST00000395111 UBTFP17480 764 aaKnown RBP25.79■■□□□ 1.72
NFIC-202ENST00000395111 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
NFIC-202ENST00000395111 RAPGEF2Q9Y4G8 1499 aa25.78■■□□□ 1.72
NFIC-202ENST00000395111 PRXQ9BXM0 1461 aa25.77■■□□□ 1.72
NFIC-202ENST00000395111 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
NFIC-202ENST00000395111 GOLGA3Q08378 1498 aa25.74■■□□□ 1.71
NFIC-202ENST00000395111 KIF21BO75037 1637 aa25.73■■□□□ 1.71
NFIC-202ENST00000395111 FBLN2P98095 1184 aa25.7■■□□□ 1.7
NFIC-202ENST00000395111 CUL7Q14999 1698 aa25.69■■□□□ 1.7
NFIC-202ENST00000395111 RANGAP1P46060 587 aaPredicted RBP25.65■■□□□ 1.7
NFIC-202ENST00000395111 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
NFIC-202ENST00000395111 ADAMTS12P58397 1594 aa25.65■■□□□ 1.7
NFIC-202ENST00000395111 CHMP7Q8WUX9 453 aaPredicted RBP25.62■■□□□ 1.69
NFIC-202ENST00000395111 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
NFIC-202ENST00000395111 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
NFIC-202ENST00000395111 TNIKQ9UKE5 1360 aa25.54■■□□□ 1.68
NFIC-202ENST00000395111 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
NFIC-202ENST00000395111 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms