Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.69■■□□□ 1.06
LSM2Q9Y333 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LSM2Q9Y333 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.69■■□□□ 1.06
LSM2Q9Y333 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
LSM2Q9Y333 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.69■■□□□ 1.06
LSM2Q9Y333 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LSM2Q9Y333 AC133561.1-201ENST00000568600 2415 ntBASIC21.68■■□□□ 1.06
LSM2Q9Y333 AC097358.2-201ENST00000607541 1159 ntBASIC21.68■■□□□ 1.06
LSM2Q9Y333 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LSM2Q9Y333 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.68■■□□□ 1.06
LSM2Q9Y333 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.68■■□□□ 1.06
LSM2Q9Y333 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LSM2Q9Y333 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LSM2Q9Y333 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LSM2Q9Y333 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSM2Q9Y333 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSM2Q9Y333 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
LSM2Q9Y333 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LSM2Q9Y333 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LSM2Q9Y333 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.66■■□□□ 1.06
LSM2Q9Y333 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.66■■□□□ 1.06
LSM2Q9Y333 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSM2Q9Y333 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LSM2Q9Y333 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 AC110285.7-201ENST00000624417 1536 ntBASIC21.65■■□□□ 1.06
LSM2Q9Y333 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.65■■□□□ 1.06
LSM2Q9Y333 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LSM2Q9Y333 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.65■■□□□ 1.06
LSM2Q9Y333 AC096887.2-201ENST00000623443 1957 ntBASIC21.65■■□□□ 1.06
LSM2Q9Y333 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LSM2Q9Y333 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
LSM2Q9Y333 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LSM2Q9Y333 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 AC005559.1-201ENST00000589661 871 ntBASIC21.63■■□□□ 1.05
LSM2Q9Y333 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.63■■□□□ 1.05
LSM2Q9Y333 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.63■■□□□ 1.05
LSM2Q9Y333 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LSM2Q9Y333 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSM2Q9Y333 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LSM2Q9Y333 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSM2Q9Y333 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LSM2Q9Y333 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LSM2Q9Y333 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.61■■□□□ 1.05
LSM2Q9Y333 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LSM2Q9Y333 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LSM2Q9Y333 AC012676.1-201ENST00000574705 1949 ntBASIC21.61■■□□□ 1.05
LSM2Q9Y333 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSM2Q9Y333 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
LSM2Q9Y333 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
LSM2Q9Y333 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSM2Q9Y333 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.6■■□□□ 1.05
LSM2Q9Y333 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.6■■□□□ 1.05
LSM2Q9Y333 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LSM2Q9Y333 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LSM2Q9Y333 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSM2Q9Y333 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
LSM2Q9Y333 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LSM2Q9Y333 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LSM2Q9Y333 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LSM2Q9Y333 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LSM2Q9Y333 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LSM2Q9Y333 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.58■■□□□ 1.05
LSM2Q9Y333 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LSM2Q9Y333 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.58■■□□□ 1.05
LSM2Q9Y333 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LSM2Q9Y333 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.58■■□□□ 1.05
LSM2Q9Y333 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.58■■□□□ 1.04
LSM2Q9Y333 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.58■■□□□ 1.04
LSM2Q9Y333 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
LSM2Q9Y333 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LSM2Q9Y333 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LSM2Q9Y333 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LSM2Q9Y333 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.57■■□□□ 1.04
LSM2Q9Y333 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
LSM2Q9Y333 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSM2Q9Y333 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LSM2Q9Y333 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LSM2Q9Y333 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSM2Q9Y333 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSM2Q9Y333 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.55■■□□□ 1.04
LSM2Q9Y333 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LSM2Q9Y333 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms