Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
RC3H2Q9HBD1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H2Q9HBD1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RC3H2Q9HBD1 AL356441.2-201ENST00000443009 864 ntBASIC26.43■■□□□ 1.82
RC3H2Q9HBD1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
RC3H2Q9HBD1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.42■■□□□ 1.82
RC3H2Q9HBD1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H2Q9HBD1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
RC3H2Q9HBD1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RC3H2Q9HBD1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 AC019069.1-201ENST00000610008 1333 ntBASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RC3H2Q9HBD1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RC3H2Q9HBD1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.4■■□□□ 1.82
RC3H2Q9HBD1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.4■■□□□ 1.82
RC3H2Q9HBD1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RC3H2Q9HBD1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 LONRF2P2-201ENST00000439212 571 ntBASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 RPS2P7-201ENST00000447334 885 ntBASIC26.39■■□□□ 1.82
RC3H2Q9HBD1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RC3H2Q9HBD1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RC3H2Q9HBD1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RC3H2Q9HBD1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H2Q9HBD1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.38■■□□□ 1.81
RC3H2Q9HBD1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.38■■□□□ 1.81
RC3H2Q9HBD1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
RC3H2Q9HBD1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H2Q9HBD1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.37■■□□□ 1.81
RC3H2Q9HBD1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RC3H2Q9HBD1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RC3H2Q9HBD1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
RC3H2Q9HBD1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H2Q9HBD1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.36■■□□□ 1.81
RC3H2Q9HBD1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.36■■□□□ 1.81
RC3H2Q9HBD1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H2Q9HBD1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
RC3H2Q9HBD1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H2Q9HBD1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H2Q9HBD1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H2Q9HBD1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RC3H2Q9HBD1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.35■■□□□ 1.81
RC3H2Q9HBD1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.35■■□□□ 1.81
RC3H2Q9HBD1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 Z92544.1-202ENST00000571933 1220 ntBASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.34■■□□□ 1.81
RC3H2Q9HBD1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 AC239859.2-201ENST00000444165 318 ntBASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.33■■□□□ 1.81
RC3H2Q9HBD1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RC3H2Q9HBD1 ABCB10P1-201ENST00000614297 2181 ntBASIC26.32■■□□□ 1.8
RC3H2Q9HBD1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RC3H2Q9HBD1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H2Q9HBD1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H2Q9HBD1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H2Q9HBD1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RC3H2Q9HBD1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H2Q9HBD1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
RC3H2Q9HBD1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RC3H2Q9HBD1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.29■■□□□ 1.8
RC3H2Q9HBD1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.28■■□□□ 1.8
RC3H2Q9HBD1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H2Q9HBD1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.27■■□□□ 1.8
RC3H2Q9HBD1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.27■■□□□ 1.8
RC3H2Q9HBD1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RC3H2Q9HBD1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms