Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 DUX4L25-201ENST00000624915 1269 ntBASIC19.19■□□□□ 0.66
RNF2Q99496 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF2Q99496 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF2Q99496 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF2Q99496 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF2Q99496 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF2Q99496 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF2Q99496 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF2Q99496 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF2Q99496 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF2Q99496 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF2Q99496 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF2Q99496 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF2Q99496 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF2Q99496 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF2Q99496 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF2Q99496 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RNF2Q99496 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RNF2Q99496 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF2Q99496 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF2Q99496 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF2Q99496 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF2Q99496 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF2Q99496 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF2Q99496 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF2Q99496 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF2Q99496 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF2Q99496 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF2Q99496 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF2Q99496 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF2Q99496 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF2Q99496 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF2Q99496 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNF2Q99496 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF2Q99496 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF2Q99496 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF2Q99496 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF2Q99496 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF2Q99496 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF2Q99496 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF2Q99496 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF2Q99496 AC093323.1-202ENST00000635031 2045 ntBASIC19.13■□□□□ 0.65
RNF2Q99496 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF2Q99496 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF2Q99496 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF2Q99496 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF2Q99496 MIR7108-201ENST00000614319 87 ntBASIC19.13■□□□□ 0.65
RNF2Q99496 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF2Q99496 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF2Q99496 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF2Q99496 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF2Q99496 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF2Q99496 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF2Q99496 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF2Q99496 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF2Q99496 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF2Q99496 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF2Q99496 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF2Q99496 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF2Q99496 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.11■□□□□ 0.65
RNF2Q99496 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF2Q99496 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF2Q99496 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF2Q99496 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF2Q99496 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF2Q99496 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF2Q99496 WHAMMP3-201ENST00000611636 1609 ntBASIC19.1■□□□□ 0.65
RNF2Q99496 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF2Q99496 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF2Q99496 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF2Q99496 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF2Q99496 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF2Q99496 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF2Q99496 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF2Q99496 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF2Q99496 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF2Q99496 CR559946.2-201ENST00000623684 991 ntBASIC19.08■□□□□ 0.64
RNF2Q99496 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF2Q99496 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF2Q99496 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF2Q99496 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
RNF2Q99496 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF2Q99496 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF2Q99496 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RNF2Q99496 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF2Q99496 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.07■□□□□ 0.64
RNF2Q99496 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RNF2Q99496 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 423.9 ms