Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.46■■□□□ 1.35
COL27A1Q8IZC6 ABCB10P1-201ENST00000614297 2181 ntBASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.35
COL27A1Q8IZC6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 AC087393.1-201ENST00000582896 145 ntBASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 THA1P-201ENST00000590384 1145 ntBASIC23.45■■□□□ 1.34
COL27A1Q8IZC6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 AC019171.1-201ENST00000601251 1056 ntBASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.44■■□□□ 1.34
COL27A1Q8IZC6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.43■■□□□ 1.34
COL27A1Q8IZC6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 AL031848.2-201ENST00000607670 837 ntBASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
COL27A1Q8IZC6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 AC018755.3-202ENST00000596210 929 ntBASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
COL27A1Q8IZC6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
COL27A1Q8IZC6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.39■■□□□ 1.34
COL27A1Q8IZC6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
COL27A1Q8IZC6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
COL27A1Q8IZC6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
COL27A1Q8IZC6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
COL27A1Q8IZC6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL27A1Q8IZC6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 RPS2P7-201ENST00000447334 885 ntBASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.36■■□□□ 1.33
COL27A1Q8IZC6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 AL356441.2-201ENST00000443009 864 ntBASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 Z92544.1-202ENST00000571933 1220 ntBASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL27A1Q8IZC6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL27A1Q8IZC6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.33■■□□□ 1.33
COL27A1Q8IZC6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.33■■□□□ 1.32
COL27A1Q8IZC6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL27A1Q8IZC6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 AL449106.1-201ENST00000608517 1980 ntBASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL27A1Q8IZC6 DRD5P2-201ENST00000421395 2012 ntBASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms