Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.94■■■□□ 2.7
ITGB4P16144 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ITGB4P16144 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ITGB4P16144 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
ITGB4P16144 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.93■■■□□ 2.7
ITGB4P16144 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.93■■■□□ 2.7
ITGB4P16144 AC087393.1-201ENST00000582896 145 ntBASIC31.93■■■□□ 2.7
ITGB4P16144 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.93■■■□□ 2.7
ITGB4P16144 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.92■■■□□ 2.7
ITGB4P16144 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.92■■■□□ 2.7
ITGB4P16144 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.92■■■□□ 2.7
ITGB4P16144 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ITGB4P16144 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
ITGB4P16144 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ITGB4P16144 AC019171.1-201ENST00000601251 1056 ntBASIC31.91■■■□□ 2.7
ITGB4P16144 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.91■■■□□ 2.7
ITGB4P16144 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ITGB4P16144 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ITGB4P16144 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.91■■■□□ 2.7
ITGB4P16144 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ITGB4P16144 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.91■■■□□ 2.7
ITGB4P16144 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.9■■■□□ 2.7
ITGB4P16144 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.89■■■□□ 2.7
ITGB4P16144 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ITGB4P16144 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.89■■■□□ 2.69
ITGB4P16144 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ITGB4P16144 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.88■■■□□ 2.69
ITGB4P16144 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC31.88■■■□□ 2.69
ITGB4P16144 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
ITGB4P16144 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ITGB4P16144 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
ITGB4P16144 AL356441.2-201ENST00000443009 864 ntBASIC31.88■■■□□ 2.69
ITGB4P16144 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ITGB4P16144 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ITGB4P16144 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ITGB4P16144 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ITGB4P16144 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ITGB4P16144 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ITGB4P16144 Z92544.1-202ENST00000571933 1220 ntBASIC31.86■■■□□ 2.69
ITGB4P16144 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.86■■■□□ 2.69
ITGB4P16144 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ITGB4P16144 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ITGB4P16144 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ITGB4P16144 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.85■■■□□ 2.69
ITGB4P16144 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
ITGB4P16144 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
ITGB4P16144 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
ITGB4P16144 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.84■■■□□ 2.69
ITGB4P16144 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
ITGB4P16144 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ITGB4P16144 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
ITGB4P16144 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.84■■■□□ 2.69
ITGB4P16144 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
ITGB4P16144 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.83■■■□□ 2.69
ITGB4P16144 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ITGB4P16144 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ITGB4P16144 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
ITGB4P16144 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ITGB4P16144 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.82■■■□□ 2.68
ITGB4P16144 RPS2P7-201ENST00000447334 885 ntBASIC31.82■■■□□ 2.68
ITGB4P16144 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ITGB4P16144 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.81■■■□□ 2.68
ITGB4P16144 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ITGB4P16144 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.8■■■□□ 2.68
ITGB4P16144 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
ITGB4P16144 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
ITGB4P16144 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
ITGB4P16144 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.79■■■□□ 2.68
ITGB4P16144 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
ITGB4P16144 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.78■■■□□ 2.68
ITGB4P16144 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ITGB4P16144 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.77■■■□□ 2.68
ITGB4P16144 AC239859.2-201ENST00000444165 318 ntBASIC31.77■■■□□ 2.68
ITGB4P16144 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.77■■■□□ 2.68
ITGB4P16144 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.77■■■□□ 2.68
ITGB4P16144 ABCB10P1-201ENST00000614297 2181 ntBASIC31.77■■■□□ 2.68
ITGB4P16144 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.77■■■□□ 2.68
ITGB4P16144 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.77■■■□□ 2.68
ITGB4P16144 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
ITGB4P16144 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
ITGB4P16144 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.75■■■□□ 2.67
ITGB4P16144 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.75■■■□□ 2.67
ITGB4P16144 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.75■■■□□ 2.67
ITGB4P16144 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.75■■■□□ 2.67
ITGB4P16144 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.75■■■□□ 2.67
ITGB4P16144 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ITGB4P16144 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ITGB4P16144 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ITGB4P16144 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ITGB4P16144 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
ITGB4P16144 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
ITGB4P16144 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ITGB4P16144 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ITGB4P16144 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ITGB4P16144 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.71■■■□□ 2.67
ITGB4P16144 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.7■■■□□ 2.67
ITGB4P16144 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.7■■■□□ 2.67
ITGB4P16144 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
ITGB4P16144 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.7■■■□□ 2.67
ITGB4P16144 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms