Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.14■■□□□ 1.93
TPM3P06753 AC012676.1-201ENST00000574705 1949 ntBASIC27.14■■□□□ 1.93
TPM3P06753 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TPM3P06753 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TPM3P06753 AL139125.2-201ENST00000623134 1869 ntBASIC27.13■■□□□ 1.93
TPM3P06753 DUX4L28-201ENST00000623687 678 ntBASIC27.13■■□□□ 1.93
TPM3P06753 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TPM3P06753 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TPM3P06753 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TPM3P06753 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TPM3P06753 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TPM3P06753 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.12■■□□□ 1.93
TPM3P06753 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TPM3P06753 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
TPM3P06753 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TPM3P06753 WHAMMP3-201ENST00000611636 1609 ntBASIC27.11■■□□□ 1.93
TPM3P06753 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 MIR3665-201ENST00000578708 105 ntBASIC27.1■■□□□ 1.93
TPM3P06753 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 AC110285.7-201ENST00000624417 1536 ntBASIC27.1■■□□□ 1.93
TPM3P06753 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TPM3P06753 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
TPM3P06753 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TPM3P06753 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TPM3P06753 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.09■■□□□ 1.93
TPM3P06753 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TPM3P06753 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.08■■□□□ 1.93
TPM3P06753 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
TPM3P06753 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TPM3P06753 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
TPM3P06753 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
TPM3P06753 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.07■■□□□ 1.92
TPM3P06753 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.07■■□□□ 1.92
TPM3P06753 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TPM3P06753 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.07■■□□□ 1.92
TPM3P06753 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
TPM3P06753 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
TPM3P06753 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.06■■□□□ 1.92
TPM3P06753 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.06■■□□□ 1.92
TPM3P06753 AC010501.1-201ENST00000606270 1962 ntBASIC27.06■■□□□ 1.92
TPM3P06753 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TPM3P06753 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TPM3P06753 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TPM3P06753 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.04■■□□□ 1.92
TPM3P06753 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.04■■□□□ 1.92
TPM3P06753 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TPM3P06753 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
TPM3P06753 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
TPM3P06753 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TPM3P06753 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
TPM3P06753 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TPM3P06753 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.03■■□□□ 1.92
TPM3P06753 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TPM3P06753 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TPM3P06753 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.02■■□□□ 1.92
TPM3P06753 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
TPM3P06753 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.02■■□□□ 1.92
TPM3P06753 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TPM3P06753 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TPM3P06753 AC138932.3-201ENST00000567634 1902 ntBASIC27.01■■□□□ 1.91
TPM3P06753 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.01■■□□□ 1.91
TPM3P06753 AC133561.1-201ENST00000568600 2415 ntBASIC27■■□□□ 1.91
TPM3P06753 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
TPM3P06753 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27■■□□□ 1.91
TPM3P06753 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27■■□□□ 1.91
TPM3P06753 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TPM3P06753 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TPM3P06753 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
TPM3P06753 AC022211.4-201ENST00000625094 2161 ntBASIC26.99■■□□□ 1.91
TPM3P06753 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TPM3P06753 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TPM3P06753 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TPM3P06753 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TPM3P06753 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TPM3P06753 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TPM3P06753 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.98■■□□□ 1.91
TPM3P06753 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
TPM3P06753 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.97■■□□□ 1.91
TPM3P06753 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TPM3P06753 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.97■■□□□ 1.91
TPM3P06753 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.97■■□□□ 1.91
TPM3P06753 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TPM3P06753 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
TPM3P06753 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TPM3P06753 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TPM3P06753 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TPM3P06753 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TPM3P06753 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TPM3P06753 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TPM3P06753 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TPM3P06753 AP006261.1-201ENST00000584783 668 ntBASIC26.95■■□□□ 1.9
TPM3P06753 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TPM3P06753 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.95■■□□□ 1.9
TPM3P06753 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.95■■□□□ 1.9
TPM3P06753 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TPM3P06753 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms