Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.33■□□□□ 0.52
LTAP01374 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.33■□□□□ 0.52
LTAP01374 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LTAP01374 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LTAP01374 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LTAP01374 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LTAP01374 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.32■□□□□ 0.52
LTAP01374 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LTAP01374 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LTAP01374 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.32■□□□□ 0.52
LTAP01374 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LTAP01374 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LTAP01374 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LTAP01374 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LTAP01374 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LTAP01374 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LTAP01374 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.31■□□□□ 0.52
LTAP01374 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LTAP01374 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.31■□□□□ 0.52
LTAP01374 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.31■□□□□ 0.52
LTAP01374 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LTAP01374 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LTAP01374 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.3■□□□□ 0.52
LTAP01374 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LTAP01374 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.3■□□□□ 0.52
LTAP01374 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LTAP01374 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LTAP01374 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTAP01374 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTAP01374 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTAP01374 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LTAP01374 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LTAP01374 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LTAP01374 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTAP01374 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTAP01374 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.28■□□□□ 0.52
LTAP01374 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.28■□□□□ 0.52
LTAP01374 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LTAP01374 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LTAP01374 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LTAP01374 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LTAP01374 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.27■□□□□ 0.52
LTAP01374 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LTAP01374 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LTAP01374 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LTAP01374 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.27■□□□□ 0.52
LTAP01374 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LTAP01374 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LTAP01374 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LTAP01374 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LTAP01374 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LTAP01374 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LTAP01374 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LTAP01374 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LTAP01374 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LTAP01374 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.25■□□□□ 0.51
LTAP01374 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.25■□□□□ 0.51
LTAP01374 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LTAP01374 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LTAP01374 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.24■□□□□ 0.51
LTAP01374 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.24■□□□□ 0.51
LTAP01374 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
LTAP01374 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LTAP01374 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LTAP01374 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LTAP01374 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LTAP01374 AC096887.2-201ENST00000623443 1957 ntBASIC18.23■□□□□ 0.51
LTAP01374 SUZ12P1-203ENST00000578195 985 ntBASIC18.23■□□□□ 0.51
LTAP01374 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LTAP01374 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LTAP01374 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
LTAP01374 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LTAP01374 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LTAP01374 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.21■□□□□ 0.51
LTAP01374 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.21■□□□□ 0.51
LTAP01374 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
LTAP01374 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LTAP01374 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LTAP01374 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.2■□□□□ 0.5
LTAP01374 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.2■□□□□ 0.5
LTAP01374 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LTAP01374 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LTAP01374 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LTAP01374 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LTAP01374 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LTAP01374 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LTAP01374 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LTAP01374 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LTAP01374 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.19■□□□□ 0.5
LTAP01374 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LTAP01374 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LTAP01374 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 233.1 ms