Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.27■■□□□ 1.32
RTCAO00442 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCAO00442 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCAO00442 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.26■■□□□ 1.31
RTCAO00442 GPX1-201ENST00000419349 1106 ntBASIC23.26■■□□□ 1.31
RTCAO00442 AC092296.2-201ENST00000589470 999 ntBASIC23.26■■□□□ 1.31
RTCAO00442 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RTCAO00442 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
RTCAO00442 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.25■■□□□ 1.31
RTCAO00442 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.24■■□□□ 1.31
RTCAO00442 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
RTCAO00442 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.24■■□□□ 1.31
RTCAO00442 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RTCAO00442 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTCAO00442 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.23■■□□□ 1.31
RTCAO00442 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
RTCAO00442 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.23■■□□□ 1.31
RTCAO00442 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RTCAO00442 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
RTCAO00442 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RTCAO00442 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTCAO00442 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RTCAO00442 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RTCAO00442 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RTCAO00442 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.22■■□□□ 1.31
RTCAO00442 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RTCAO00442 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.22■■□□□ 1.31
RTCAO00442 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.22■■□□□ 1.31
RTCAO00442 AC092803.2-201ENST00000564287 1899 ntBASIC23.22■■□□□ 1.31
RTCAO00442 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.21■■□□□ 1.31
RTCAO00442 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.21■■□□□ 1.31
RTCAO00442 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
RTCAO00442 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.2■■□□□ 1.3
RTCAO00442 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
RTCAO00442 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTCAO00442 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTCAO00442 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RTCAO00442 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RTCAO00442 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.2■■□□□ 1.3
RTCAO00442 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTCAO00442 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.19■■□□□ 1.3
RTCAO00442 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
RTCAO00442 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTCAO00442 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.18■■□□□ 1.3
RTCAO00442 AC025884.2-201ENST00000553429 711 ntBASIC23.18■■□□□ 1.3
RTCAO00442 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RTCAO00442 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RTCAO00442 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
RTCAO00442 SMPD5-203ENST00000639008 1464 ntBASIC23.17■■□□□ 1.3
RTCAO00442 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.17■■□□□ 1.3
RTCAO00442 ECEL1P2-201ENST00000461596 1295 ntBASIC23.17■■□□□ 1.3
RTCAO00442 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTCAO00442 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RTCAO00442 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.17■■□□□ 1.3
RTCAO00442 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RTCAO00442 ERN1-208ENST00000606895 2068 ntBASIC23.17■■□□□ 1.3
RTCAO00442 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTCAO00442 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTCAO00442 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTCAO00442 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.16■■□□□ 1.3
RTCAO00442 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RTCAO00442 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTCAO00442 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RTCAO00442 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCAO00442 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.15■■□□□ 1.3
RTCAO00442 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTCAO00442 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.15■■□□□ 1.3
RTCAO00442 AC145676.1-201ENST00000514988 2004 ntBASIC23.15■■□□□ 1.3
RTCAO00442 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
RTCAO00442 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTCAO00442 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RTCAO00442 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTCAO00442 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.14■■□□□ 1.29
RTCAO00442 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTCAO00442 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.14■■□□□ 1.29
RTCAO00442 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
RTCAO00442 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCAO00442 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RTCAO00442 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RTCAO00442 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.12■■□□□ 1.29
RTCAO00442 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.12■■□□□ 1.29
RTCAO00442 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.12■■□□□ 1.29
RTCAO00442 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RTCAO00442 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
RTCAO00442 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCAO00442 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTCAO00442 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.1■■□□□ 1.29
RTCAO00442 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCAO00442 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.1■■□□□ 1.29
RTCAO00442 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCAO00442 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTCAO00442 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.09■■□□□ 1.29
RTCAO00442 DUSP8P4-201ENST00000399538 1761 ntBASIC23.09■■□□□ 1.29
RTCAO00442 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms