Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRDV1A0A1B0GX56 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRDV1A0A1B0GX56 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRDV1A0A1B0GX56 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.42■■□□□ 1.02
TRDV1A0A1B0GX56 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.42■■□□□ 1.02
TRDV1A0A1B0GX56 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 AC136428.2-201ENST00000563187 214 ntBASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRDV1A0A1B0GX56 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRDV1A0A1B0GX56 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.4■■□□□ 1.02
TRDV1A0A1B0GX56 MIR6090-201ENST00000622481 60 ntBASIC21.4■■□□□ 1.02
TRDV1A0A1B0GX56 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRDV1A0A1B0GX56 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.4■■□□□ 1.02
TRDV1A0A1B0GX56 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.39■■□□□ 1.01
TRDV1A0A1B0GX56 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRDV1A0A1B0GX56 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.39■■□□□ 1.01
TRDV1A0A1B0GX56 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.39■■□□□ 1.01
TRDV1A0A1B0GX56 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.39■■□□□ 1.01
TRDV1A0A1B0GX56 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRDV1A0A1B0GX56 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 AC012676.1-201ENST00000574705 1949 ntBASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRDV1A0A1B0GX56 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 AC133561.1-201ENST00000568600 2415 ntBASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.36■■□□□ 1.01
TRDV1A0A1B0GX56 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 AC110285.7-201ENST00000624417 1536 ntBASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRDV1A0A1B0GX56 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRDV1A0A1B0GX56 AC097358.2-201ENST00000607541 1159 ntBASIC21.34■■□□□ 1.01
TRDV1A0A1B0GX56 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRDV1A0A1B0GX56 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRDV1A0A1B0GX56 AC005559.1-201ENST00000589661 871 ntBASIC21.33■■□□□ 1.01
TRDV1A0A1B0GX56 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRDV1A0A1B0GX56 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
TRDV1A0A1B0GX56 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRDV1A0A1B0GX56 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 AC096887.2-201ENST00000623443 1957 ntBASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRDV1A0A1B0GX56 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.3■■□□□ 1
TRDV1A0A1B0GX56 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRDV1A0A1B0GX56 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
TRDV1A0A1B0GX56 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms