Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSM4Q9Y4Z0 AP004609.3-201ENST00000610705 1884 ntBASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.56■□□□□ 0.72
LSM4Q9Y4Z0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LSM4Q9Y4Z0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSM4Q9Y4Z0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM4Q9Y4Z0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM4Q9Y4Z0 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM4Q9Y4Z0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSM4Q9Y4Z0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM4Q9Y4Z0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.54■□□□□ 0.72
LSM4Q9Y4Z0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.53■□□□□ 0.72
LSM4Q9Y4Z0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LSM4Q9Y4Z0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM4Q9Y4Z0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM4Q9Y4Z0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.53■□□□□ 0.72
LSM4Q9Y4Z0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSM4Q9Y4Z0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LSM4Q9Y4Z0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LSM4Q9Y4Z0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LSM4Q9Y4Z0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LSM4Q9Y4Z0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
LSM4Q9Y4Z0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LSM4Q9Y4Z0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LSM4Q9Y4Z0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM4Q9Y4Z0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LSM4Q9Y4Z0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LSM4Q9Y4Z0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM4Q9Y4Z0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LSM4Q9Y4Z0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM4Q9Y4Z0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM4Q9Y4Z0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM4Q9Y4Z0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LSM4Q9Y4Z0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.47■□□□□ 0.71
LSM4Q9Y4Z0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM4Q9Y4Z0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM4Q9Y4Z0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LSM4Q9Y4Z0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.47■□□□□ 0.71
LSM4Q9Y4Z0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 AC093323.1-202ENST00000635031 2045 ntBASIC19.46■□□□□ 0.71
LSM4Q9Y4Z0 AC142472.1-201ENST00000612013 1741 ntBASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LSM4Q9Y4Z0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LSM4Q9Y4Z0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LSM4Q9Y4Z0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LSM4Q9Y4Z0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.43■□□□□ 0.7
LSM4Q9Y4Z0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.43■□□□□ 0.7
LSM4Q9Y4Z0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.42■□□□□ 0.7
LSM4Q9Y4Z0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM4Q9Y4Z0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM4Q9Y4Z0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.42■□□□□ 0.7
LSM4Q9Y4Z0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LSM4Q9Y4Z0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms