Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TREM2Q9NZC2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TREM2Q9NZC2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TREM2Q9NZC2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TREM2Q9NZC2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TREM2Q9NZC2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.06■□□□□ 0.96
TREM2Q9NZC2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TREM2Q9NZC2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TREM2Q9NZC2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TREM2Q9NZC2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.06■□□□□ 0.96
TREM2Q9NZC2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.05■□□□□ 0.96
TREM2Q9NZC2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREM2Q9NZC2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TREM2Q9NZC2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TREM2Q9NZC2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TREM2Q9NZC2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TREM2Q9NZC2 AC126177.7-201ENST00000547904 679 ntBASIC21.05■□□□□ 0.96
TREM2Q9NZC2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TREM2Q9NZC2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TREM2Q9NZC2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TREM2Q9NZC2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TREM2Q9NZC2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TREM2Q9NZC2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.02■□□□□ 0.96
TREM2Q9NZC2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TREM2Q9NZC2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TREM2Q9NZC2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TREM2Q9NZC2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.02■□□□□ 0.96
TREM2Q9NZC2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.02■□□□□ 0.95
TREM2Q9NZC2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TREM2Q9NZC2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TREM2Q9NZC2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21■□□□□ 0.95
TREM2Q9NZC2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
TREM2Q9NZC2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TREM2Q9NZC2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TREM2Q9NZC2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TREM2Q9NZC2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREM2Q9NZC2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREM2Q9NZC2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TREM2Q9NZC2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
TREM2Q9NZC2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TREM2Q9NZC2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.97■□□□□ 0.95
TREM2Q9NZC2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TREM2Q9NZC2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.97■□□□□ 0.95
TREM2Q9NZC2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TREM2Q9NZC2 AC092296.2-201ENST00000589470 999 ntBASIC20.96■□□□□ 0.95
TREM2Q9NZC2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TREM2Q9NZC2 AL157400.5-201ENST00000507624 621 ntBASIC20.95■□□□□ 0.94
TREM2Q9NZC2 NTF6A-201ENST00000591175 560 ntBASIC20.95■□□□□ 0.94
TREM2Q9NZC2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.95■□□□□ 0.94
TREM2Q9NZC2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.94■□□□□ 0.94
TREM2Q9NZC2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TREM2Q9NZC2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TREM2Q9NZC2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TREM2Q9NZC2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TREM2Q9NZC2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TREM2Q9NZC2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TREM2Q9NZC2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.91■□□□□ 0.94
TREM2Q9NZC2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.91■□□□□ 0.94
TREM2Q9NZC2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms