Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
POLR2J3Q9H1A7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
POLR2J3Q9H1A7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR2J3Q9H1A7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.52■■□□□ 1.19
POLR2J3Q9H1A7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR2J3Q9H1A7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 RPS2P35-201ENST00000443417 897 ntBASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
POLR2J3Q9H1A7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 AC148477.6-201ENST00000623746 465 ntBASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR2J3Q9H1A7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR2J3Q9H1A7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR2J3Q9H1A7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 DUX4L11-201ENST00000611504 1267 ntBASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 DUX4L12-201ENST00000614593 1267 ntBASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 DUX4L14-201ENST00000621227 1267 ntBASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR2J3Q9H1A7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.45■■□□□ 1.18
POLR2J3Q9H1A7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.44■■□□□ 1.18
POLR2J3Q9H1A7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
POLR2J3Q9H1A7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.42■■□□□ 1.18
POLR2J3Q9H1A7 MIR219A2-201ENST00000608502 1504 ntBASIC22.42■■□□□ 1.18
POLR2J3Q9H1A7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
POLR2J3Q9H1A7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms