Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ALX4Q9H161 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ALX4Q9H161 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.64■□□□□ 0.89
ALX4Q9H161 AC012676.1-201ENST00000574705 1949 ntBASIC20.64■□□□□ 0.89
ALX4Q9H161 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ALX4Q9H161 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ALX4Q9H161 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALX4Q9H161 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALX4Q9H161 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALX4Q9H161 AC087741.3-201ENST00000624270 1347 ntBASIC20.63■□□□□ 0.89
ALX4Q9H161 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.63■□□□□ 0.89
ALX4Q9H161 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.63■□□□□ 0.89
ALX4Q9H161 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ALX4Q9H161 AL139125.2-201ENST00000623134 1869 ntBASIC20.62■□□□□ 0.89
ALX4Q9H161 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ALX4Q9H161 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ALX4Q9H161 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALX4Q9H161 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.61■□□□□ 0.89
ALX4Q9H161 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.61■□□□□ 0.89
ALX4Q9H161 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALX4Q9H161 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.61■□□□□ 0.89
ALX4Q9H161 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALX4Q9H161 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALX4Q9H161 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALX4Q9H161 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ALX4Q9H161 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
ALX4Q9H161 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALX4Q9H161 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALX4Q9H161 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ALX4Q9H161 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALX4Q9H161 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.6■□□□□ 0.89
ALX4Q9H161 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALX4Q9H161 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALX4Q9H161 AC142472.1-201ENST00000612013 1741 ntBASIC20.59■□□□□ 0.89
ALX4Q9H161 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.59■□□□□ 0.89
ALX4Q9H161 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALX4Q9H161 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ALX4Q9H161 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ALX4Q9H161 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ALX4Q9H161 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALX4Q9H161 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.58■□□□□ 0.88
ALX4Q9H161 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ALX4Q9H161 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ALX4Q9H161 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALX4Q9H161 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALX4Q9H161 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.56■□□□□ 0.88
ALX4Q9H161 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ALX4Q9H161 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.56■□□□□ 0.88
ALX4Q9H161 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
ALX4Q9H161 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ALX4Q9H161 AC135983.2-203ENST00000454486 1613 ntBASIC20.56■□□□□ 0.88
ALX4Q9H161 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX4Q9H161 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.55■□□□□ 0.88
ALX4Q9H161 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX4Q9H161 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ALX4Q9H161 AC010501.1-201ENST00000606270 1962 ntBASIC20.55■□□□□ 0.88
ALX4Q9H161 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ALX4Q9H161 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
ALX4Q9H161 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ALX4Q9H161 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALX4Q9H161 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ALX4Q9H161 AC133561.1-201ENST00000568600 2415 ntBASIC20.54■□□□□ 0.88
ALX4Q9H161 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.53■□□□□ 0.88
ALX4Q9H161 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ALX4Q9H161 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ALX4Q9H161 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ALX4Q9H161 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALX4Q9H161 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ALX4Q9H161 AC044849.2-201ENST00000606596 710 ntBASIC20.52■□□□□ 0.88
ALX4Q9H161 AC138932.3-201ENST00000567634 1902 ntBASIC20.52■□□□□ 0.88
ALX4Q9H161 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ALX4Q9H161 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.52■□□□□ 0.88
ALX4Q9H161 AC022211.4-201ENST00000625094 2161 ntBASIC20.52■□□□□ 0.88
ALX4Q9H161 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ALX4Q9H161 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ALX4Q9H161 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ALX4Q9H161 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALX4Q9H161 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.51■□□□□ 0.87
ALX4Q9H161 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.51■□□□□ 0.87
ALX4Q9H161 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ALX4Q9H161 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ALX4Q9H161 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
ALX4Q9H161 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.5■□□□□ 0.87
ALX4Q9H161 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ALX4Q9H161 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.5■□□□□ 0.87
ALX4Q9H161 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ALX4Q9H161 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ALX4Q9H161 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms