Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF5Q99942 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF5Q99942 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF5Q99942 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF5Q99942 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF5Q99942 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF5Q99942 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF5Q99942 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF5Q99942 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RNF5Q99942 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF5Q99942 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF5Q99942 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF5Q99942 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF5Q99942 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF5Q99942 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF5Q99942 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF5Q99942 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF5Q99942 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF5Q99942 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF5Q99942 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF5Q99942 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF5Q99942 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF5Q99942 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF5Q99942 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF5Q99942 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF5Q99942 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF5Q99942 AL359504.2-201ENST00000605506 1601 ntBASIC19.62■□□□□ 0.73
RNF5Q99942 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF5Q99942 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF5Q99942 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF5Q99942 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF5Q99942 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF5Q99942 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF5Q99942 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF5Q99942 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF5Q99942 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF5Q99942 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF5Q99942 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF5Q99942 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF5Q99942 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF5Q99942 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF5Q99942 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF5Q99942 MIR4449-201ENST00000578365 66 ntBASIC19.6■□□□□ 0.73
RNF5Q99942 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF5Q99942 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF5Q99942 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF5Q99942 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF5Q99942 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF5Q99942 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF5Q99942 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RNF5Q99942 AC091060.1-201ENST00000623524 1766 ntBASIC19.59■□□□□ 0.73
RNF5Q99942 AC145676.1-201ENST00000514988 2004 ntBASIC19.59■□□□□ 0.73
RNF5Q99942 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF5Q99942 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF5Q99942 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF5Q99942 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF5Q99942 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF5Q99942 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF5Q99942 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF5Q99942 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RNF5Q99942 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF5Q99942 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF5Q99942 AC092803.2-201ENST00000564287 1899 ntBASIC19.57■□□□□ 0.72
RNF5Q99942 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF5Q99942 AC060814.1-201ENST00000554326 538 ntBASIC19.57■□□□□ 0.72
RNF5Q99942 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF5Q99942 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF5Q99942 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF5Q99942 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF5Q99942 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF5Q99942 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF5Q99942 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF5Q99942 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF5Q99942 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF5Q99942 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RNF5Q99942 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF5Q99942 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF5Q99942 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF5Q99942 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF5Q99942 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF5Q99942 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF5Q99942 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF5Q99942 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF5Q99942 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF5Q99942 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF5Q99942 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF5Q99942 DUSP8P4-201ENST00000399538 1761 ntBASIC19.54■□□□□ 0.72
RNF5Q99942 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF5Q99942 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF5Q99942 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF5Q99942 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF5Q99942 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF5Q99942 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF5Q99942 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF5Q99942 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF5Q99942 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF5Q99942 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF5Q99942 AC022413.1-201ENST00000624602 984 ntBASIC19.52■□□□□ 0.72
RNF5Q99942 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF5Q99942 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms