Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SIMC1Q8NDZ2 AP004609.3-201ENST00000610705 1884 ntBASIC23.09■■□□□ 1.29
SIMC1Q8NDZ2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SIMC1Q8NDZ2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIMC1Q8NDZ2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIMC1Q8NDZ2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.07■■□□□ 1.28
SIMC1Q8NDZ2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.07■■□□□ 1.28
SIMC1Q8NDZ2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIMC1Q8NDZ2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.06■■□□□ 1.28
SIMC1Q8NDZ2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIMC1Q8NDZ2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.05■■□□□ 1.28
SIMC1Q8NDZ2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIMC1Q8NDZ2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIMC1Q8NDZ2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
SIMC1Q8NDZ2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIMC1Q8NDZ2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
SIMC1Q8NDZ2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIMC1Q8NDZ2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIMC1Q8NDZ2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SIMC1Q8NDZ2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIMC1Q8NDZ2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.03■■□□□ 1.28
SIMC1Q8NDZ2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIMC1Q8NDZ2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.03■■□□□ 1.28
SIMC1Q8NDZ2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIMC1Q8NDZ2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIMC1Q8NDZ2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.02■■□□□ 1.28
SIMC1Q8NDZ2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
SIMC1Q8NDZ2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.02■■□□□ 1.28
SIMC1Q8NDZ2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
SIMC1Q8NDZ2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SIMC1Q8NDZ2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23■■□□□ 1.27
SIMC1Q8NDZ2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23■■□□□ 1.27
SIMC1Q8NDZ2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23■■□□□ 1.27
SIMC1Q8NDZ2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23■■□□□ 1.27
SIMC1Q8NDZ2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23■■□□□ 1.27
SIMC1Q8NDZ2 AC142472.1-201ENST00000612013 1741 ntBASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIMC1Q8NDZ2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 AC060814.1-201ENST00000554326 538 ntBASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SIMC1Q8NDZ2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 AL359504.2-201ENST00000605506 1601 ntBASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SIMC1Q8NDZ2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIMC1Q8NDZ2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SIMC1Q8NDZ2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIMC1Q8NDZ2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SIMC1Q8NDZ2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SIMC1Q8NDZ2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SIMC1Q8NDZ2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SIMC1Q8NDZ2 AL157400.5-201ENST00000507624 621 ntBASIC22.95■■□□□ 1.26
SIMC1Q8NDZ2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.95■■□□□ 1.26
SIMC1Q8NDZ2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SIMC1Q8NDZ2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 AC022413.1-201ENST00000624602 984 ntBASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SIMC1Q8NDZ2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIMC1Q8NDZ2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.92■■□□□ 1.26
SIMC1Q8NDZ2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIMC1Q8NDZ2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SIMC1Q8NDZ2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SIMC1Q8NDZ2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SIMC1Q8NDZ2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SIMC1Q8NDZ2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms