Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
LDLRAD3Q86YD5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
LDLRAD3Q86YD5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LDLRAD3Q86YD5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LDLRAD3Q86YD5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD3Q86YD5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD3Q86YD5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD3Q86YD5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD3Q86YD5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
LDLRAD3Q86YD5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAD3Q86YD5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD3Q86YD5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
LDLRAD3Q86YD5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD3Q86YD5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD3Q86YD5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LDLRAD3Q86YD5 HSD17B1P1-201ENST00000590052 955 ntBASIC20.74■□□□□ 0.91
LDLRAD3Q86YD5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.74■□□□□ 0.91
LDLRAD3Q86YD5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LDLRAD3Q86YD5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD3Q86YD5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.73■□□□□ 0.91
LDLRAD3Q86YD5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD3Q86YD5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LDLRAD3Q86YD5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LDLRAD3Q86YD5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LDLRAD3Q86YD5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.72■□□□□ 0.91
LDLRAD3Q86YD5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD3Q86YD5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD3Q86YD5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LDLRAD3Q86YD5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LDLRAD3Q86YD5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LDLRAD3Q86YD5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LDLRAD3Q86YD5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LDLRAD3Q86YD5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 AC145676.1-201ENST00000514988 2004 ntBASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.68■□□□□ 0.9
LDLRAD3Q86YD5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAD3Q86YD5 AC008813.1-201ENST00000536597 885 ntBASIC20.67■□□□□ 0.9
LDLRAD3Q86YD5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.67■□□□□ 0.9
LDLRAD3Q86YD5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAD3Q86YD5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAD3Q86YD5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.65■□□□□ 0.9
LDLRAD3Q86YD5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.65■□□□□ 0.9
LDLRAD3Q86YD5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAD3Q86YD5 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LDLRAD3Q86YD5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAD3Q86YD5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LDLRAD3Q86YD5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.64■□□□□ 0.9
LDLRAD3Q86YD5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.64■□□□□ 0.89
LDLRAD3Q86YD5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAD3Q86YD5 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAD3Q86YD5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms