Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX53Q86TM3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX53Q86TM3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX53Q86TM3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
DDX53Q86TM3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX53Q86TM3 ABCB10P1-201ENST00000614297 2181 ntBASIC26.33■■□□□ 1.81
DDX53Q86TM3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX53Q86TM3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX53Q86TM3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX53Q86TM3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.32■■□□□ 1.8
DDX53Q86TM3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX53Q86TM3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX53Q86TM3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX53Q86TM3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX53Q86TM3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX53Q86TM3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX53Q86TM3 AC103834.1-201ENST00000520383 144 ntBASIC26.3■■□□□ 1.8
DDX53Q86TM3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.3■■□□□ 1.8
DDX53Q86TM3 PVT1_1.1-201ENST00000615125 194 ntBASIC26.3■■□□□ 1.8
DDX53Q86TM3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX53Q86TM3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX53Q86TM3 YBX1P4-201ENST00000392794 808 ntBASIC26.29■■□□□ 1.8
DDX53Q86TM3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX53Q86TM3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.28■■□□□ 1.8
DDX53Q86TM3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX53Q86TM3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX53Q86TM3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX53Q86TM3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.27■■□□□ 1.8
DDX53Q86TM3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX53Q86TM3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
DDX53Q86TM3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX53Q86TM3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX53Q86TM3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.26■■□□□ 1.79
DDX53Q86TM3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.26■■□□□ 1.79
DDX53Q86TM3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
DDX53Q86TM3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX53Q86TM3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX53Q86TM3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX53Q86TM3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX53Q86TM3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX53Q86TM3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX53Q86TM3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.24■■□□□ 1.79
DDX53Q86TM3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX53Q86TM3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
DDX53Q86TM3 AC009299.2-201ENST00000482477 511 ntBASIC26.23■■□□□ 1.79
DDX53Q86TM3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
DDX53Q86TM3 MIR4508-201ENST00000584178 70 ntBASIC26.23■■□□□ 1.79
DDX53Q86TM3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
DDX53Q86TM3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.23■■□□□ 1.79
DDX53Q86TM3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
DDX53Q86TM3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX53Q86TM3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.22■■□□□ 1.79
DDX53Q86TM3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX53Q86TM3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.22■■□□□ 1.79
DDX53Q86TM3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX53Q86TM3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX53Q86TM3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX53Q86TM3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX53Q86TM3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX53Q86TM3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.21■■□□□ 1.79
DDX53Q86TM3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX53Q86TM3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
DDX53Q86TM3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX53Q86TM3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX53Q86TM3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.2■■□□□ 1.78
DDX53Q86TM3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX53Q86TM3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX53Q86TM3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX53Q86TM3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX53Q86TM3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
DDX53Q86TM3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
DDX53Q86TM3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX53Q86TM3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
DDX53Q86TM3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX53Q86TM3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX53Q86TM3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
DDX53Q86TM3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
DDX53Q86TM3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX53Q86TM3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX53Q86TM3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
DDX53Q86TM3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX53Q86TM3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX53Q86TM3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX53Q86TM3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX53Q86TM3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.16■■□□□ 1.78
DDX53Q86TM3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
DDX53Q86TM3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX53Q86TM3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX53Q86TM3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX53Q86TM3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX53Q86TM3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX53Q86TM3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX53Q86TM3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.15■■□□□ 1.78
DDX53Q86TM3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX53Q86TM3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX53Q86TM3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
DDX53Q86TM3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX53Q86TM3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX53Q86TM3 AC019171.1-201ENST00000601251 1056 ntBASIC26.14■■□□□ 1.78
DDX53Q86TM3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms