Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CBWD6Q4V339 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD6Q4V339 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD6Q4V339 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD6Q4V339 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD6Q4V339 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CBWD6Q4V339 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CBWD6Q4V339 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CBWD6Q4V339 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.63■■□□□ 1.85
CBWD6Q4V339 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD6Q4V339 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD6Q4V339 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD6Q4V339 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD6Q4V339 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CBWD6Q4V339 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 AC091060.1-201ENST00000623524 1766 ntBASIC26.61■■□□□ 1.85
CBWD6Q4V339 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CBWD6Q4V339 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
CBWD6Q4V339 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CBWD6Q4V339 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.61■■□□□ 1.85
CBWD6Q4V339 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CBWD6Q4V339 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CBWD6Q4V339 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CBWD6Q4V339 AL359504.2-201ENST00000605506 1601 ntBASIC26.6■■□□□ 1.85
CBWD6Q4V339 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.59■■□□□ 1.85
CBWD6Q4V339 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CBWD6Q4V339 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CBWD6Q4V339 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.59■■□□□ 1.85
CBWD6Q4V339 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CBWD6Q4V339 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.58■■□□□ 1.85
CBWD6Q4V339 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CBWD6Q4V339 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.58■■□□□ 1.85
CBWD6Q4V339 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CBWD6Q4V339 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
CBWD6Q4V339 MIR4449-201ENST00000578365 66 ntBASIC26.57■■□□□ 1.84
CBWD6Q4V339 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CBWD6Q4V339 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CBWD6Q4V339 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CBWD6Q4V339 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CBWD6Q4V339 AC126177.7-201ENST00000547904 679 ntBASIC26.56■■□□□ 1.84
CBWD6Q4V339 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CBWD6Q4V339 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.56■■□□□ 1.84
CBWD6Q4V339 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CBWD6Q4V339 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CBWD6Q4V339 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.55■■□□□ 1.84
CBWD6Q4V339 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CBWD6Q4V339 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CBWD6Q4V339 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.55■■□□□ 1.84
CBWD6Q4V339 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
CBWD6Q4V339 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
CBWD6Q4V339 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.54■■□□□ 1.84
CBWD6Q4V339 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.53■■□□□ 1.84
CBWD6Q4V339 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CBWD6Q4V339 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.53■■□□□ 1.84
CBWD6Q4V339 AC060814.1-201ENST00000554326 538 ntBASIC26.53■■□□□ 1.84
CBWD6Q4V339 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.53■■□□□ 1.84
CBWD6Q4V339 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CBWD6Q4V339 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CBWD6Q4V339 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CBWD6Q4V339 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.52■■□□□ 1.84
CBWD6Q4V339 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CBWD6Q4V339 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CBWD6Q4V339 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CBWD6Q4V339 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CBWD6Q4V339 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.51■■□□□ 1.83
CBWD6Q4V339 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CBWD6Q4V339 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CBWD6Q4V339 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.51■■□□□ 1.83
CBWD6Q4V339 AL157400.5-201ENST00000507624 621 ntBASIC26.51■■□□□ 1.83
CBWD6Q4V339 AC092803.2-201ENST00000564287 1899 ntBASIC26.51■■□□□ 1.83
CBWD6Q4V339 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CBWD6Q4V339 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CBWD6Q4V339 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CBWD6Q4V339 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.49■■□□□ 1.83
CBWD6Q4V339 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
CBWD6Q4V339 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CBWD6Q4V339 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CBWD6Q4V339 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CBWD6Q4V339 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CBWD6Q4V339 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CBWD6Q4V339 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CBWD6Q4V339 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CBWD6Q4V339 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CBWD6Q4V339 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.47■■□□□ 1.83
CBWD6Q4V339 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.47■■□□□ 1.83
CBWD6Q4V339 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CBWD6Q4V339 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CBWD6Q4V339 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.47■■□□□ 1.83
CBWD6Q4V339 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CBWD6Q4V339 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CBWD6Q4V339 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.46■■□□□ 1.83
CBWD6Q4V339 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CBWD6Q4V339 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CBWD6Q4V339 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CBWD6Q4V339 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms