Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.44■■□□□ 1.34
RAB8AP61006 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAB8AP61006 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB8AP61006 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
RAB8AP61006 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.43■■□□□ 1.34
RAB8AP61006 AL157400.5-201ENST00000507624 621 ntBASIC23.43■■□□□ 1.34
RAB8AP61006 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.43■■□□□ 1.34
RAB8AP61006 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB8AP61006 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB8AP61006 AL359504.2-201ENST00000605506 1601 ntBASIC23.42■■□□□ 1.34
RAB8AP61006 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB8AP61006 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.42■■□□□ 1.34
RAB8AP61006 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.42■■□□□ 1.34
RAB8AP61006 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.41■■□□□ 1.34
RAB8AP61006 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB8AP61006 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB8AP61006 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.4■■□□□ 1.34
RAB8AP61006 AC142472.1-201ENST00000612013 1741 ntBASIC23.4■■□□□ 1.34
RAB8AP61006 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB8AP61006 AC092296.2-201ENST00000589470 999 ntBASIC23.4■■□□□ 1.34
RAB8AP61006 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RAB8AP61006 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAB8AP61006 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.39■■□□□ 1.33
RAB8AP61006 HSD17B1P1-201ENST00000590052 955 ntBASIC23.39■■□□□ 1.33
RAB8AP61006 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB8AP61006 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RAB8AP61006 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB8AP61006 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB8AP61006 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.38■■□□□ 1.33
RAB8AP61006 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.38■■□□□ 1.33
RAB8AP61006 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RAB8AP61006 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB8AP61006 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RAB8AP61006 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.36■■□□□ 1.33
RAB8AP61006 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAB8AP61006 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAB8AP61006 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.36■■□□□ 1.33
RAB8AP61006 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RAB8AP61006 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RAB8AP61006 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB8AP61006 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RAB8AP61006 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
RAB8AP61006 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.35■■□□□ 1.33
RAB8AP61006 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB8AP61006 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB8AP61006 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RAB8AP61006 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RAB8AP61006 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.34■■□□□ 1.33
RAB8AP61006 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RAB8AP61006 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.34■■□□□ 1.33
RAB8AP61006 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RAB8AP61006 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
RAB8AP61006 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RAB8AP61006 ECEL1P2-201ENST00000461596 1295 ntBASIC23.33■■□□□ 1.33
RAB8AP61006 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.33■■□□□ 1.32
RAB8AP61006 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RAB8AP61006 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAB8AP61006 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAB8AP61006 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.33■■□□□ 1.32
RAB8AP61006 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RAB8AP61006 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB8AP61006 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.32■■□□□ 1.32
RAB8AP61006 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB8AP61006 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB8AP61006 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RAB8AP61006 RNF126P1-201ENST00000567452 1320 ntBASIC23.32■■□□□ 1.32
RAB8AP61006 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RAB8AP61006 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RAB8AP61006 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB8AP61006 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.31■■□□□ 1.32
RAB8AP61006 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.31■■□□□ 1.32
RAB8AP61006 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB8AP61006 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RAB8AP61006 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.31■■□□□ 1.32
RAB8AP61006 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RAB8AP61006 SMPD5-203ENST00000639008 1464 ntBASIC23.3■■□□□ 1.32
RAB8AP61006 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAB8AP61006 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.3■■□□□ 1.32
RAB8AP61006 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.3■■□□□ 1.32
RAB8AP61006 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.3■■□□□ 1.32
RAB8AP61006 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RAB8AP61006 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.29■■□□□ 1.32
RAB8AP61006 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB8AP61006 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB8AP61006 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB8AP61006 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB8AP61006 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RAB8AP61006 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAB8AP61006 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.28■■□□□ 1.32
RAB8AP61006 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RAB8AP61006 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RAB8AP61006 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RAB8AP61006 AC025884.2-201ENST00000553429 711 ntBASIC23.27■■□□□ 1.32
RAB8AP61006 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RAB8AP61006 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RAB8AP61006 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.27■■□□□ 1.32
RAB8AP61006 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
RAB8AP61006 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.26■■□□□ 1.31
RAB8AP61006 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.26■■□□□ 1.31
RAB8AP61006 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms