Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
BRPF1P55201 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
BRPF1P55201 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BRPF1P55201 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BRPF1P55201 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BRPF1P55201 AL157400.5-201ENST00000507624 621 ntBASIC31.49■■■□□ 2.63
BRPF1P55201 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
BRPF1P55201 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
BRPF1P55201 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
BRPF1P55201 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
BRPF1P55201 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
BRPF1P55201 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
BRPF1P55201 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
BRPF1P55201 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
BRPF1P55201 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.47■■■□□ 2.63
BRPF1P55201 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRPF1P55201 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRPF1P55201 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BRPF1P55201 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BRPF1P55201 RNF126P1-201ENST00000567452 1320 ntBASIC31.47■■■□□ 2.63
BRPF1P55201 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.47■■■□□ 2.63
BRPF1P55201 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BRPF1P55201 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
BRPF1P55201 AC092296.2-201ENST00000589470 999 ntBASIC31.46■■■□□ 2.63
BRPF1P55201 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
BRPF1P55201 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
BRPF1P55201 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
BRPF1P55201 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.45■■■□□ 2.63
BRPF1P55201 GPX1-201ENST00000419349 1106 ntBASIC31.45■■■□□ 2.63
BRPF1P55201 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.45■■■□□ 2.62
BRPF1P55201 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
BRPF1P55201 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
BRPF1P55201 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
BRPF1P55201 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
BRPF1P55201 AL359504.2-201ENST00000605506 1601 ntBASIC31.45■■■□□ 2.62
BRPF1P55201 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.45■■■□□ 2.62
BRPF1P55201 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.44■■■□□ 2.62
BRPF1P55201 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
BRPF1P55201 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.44■■■□□ 2.62
BRPF1P55201 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
BRPF1P55201 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
BRPF1P55201 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
BRPF1P55201 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.43■■■□□ 2.62
BRPF1P55201 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.43■■■□□ 2.62
BRPF1P55201 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.42■■■□□ 2.62
BRPF1P55201 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.42■■■□□ 2.62
BRPF1P55201 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
BRPF1P55201 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
BRPF1P55201 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
BRPF1P55201 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.41■■■□□ 2.62
BRPF1P55201 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRPF1P55201 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
BRPF1P55201 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
BRPF1P55201 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
BRPF1P55201 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
BRPF1P55201 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
BRPF1P55201 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.39■■■□□ 2.62
BRPF1P55201 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.39■■■□□ 2.62
BRPF1P55201 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
BRPF1P55201 AC012354.3-201ENST00000623734 483 ntBASIC31.39■■■□□ 2.62
BRPF1P55201 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BRPF1P55201 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
BRPF1P55201 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.38■■■□□ 2.61
BRPF1P55201 AC025884.2-201ENST00000553429 711 ntBASIC31.38■■■□□ 2.61
BRPF1P55201 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.38■■■□□ 2.61
BRPF1P55201 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.38■■■□□ 2.61
BRPF1P55201 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BRPF1P55201 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
BRPF1P55201 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
BRPF1P55201 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
BRPF1P55201 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
BRPF1P55201 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
BRPF1P55201 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.36■■■□□ 2.61
BRPF1P55201 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
BRPF1P55201 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
BRPF1P55201 AC022413.1-201ENST00000624602 984 ntBASIC31.35■■■□□ 2.61
BRPF1P55201 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRPF1P55201 NTF6A-201ENST00000591175 560 ntBASIC31.34■■■□□ 2.61
BRPF1P55201 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
BRPF1P55201 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
BRPF1P55201 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.33■■■□□ 2.61
BRPF1P55201 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.33■■■□□ 2.61
BRPF1P55201 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
BRPF1P55201 ECEL1P2-201ENST00000461596 1295 ntBASIC31.32■■■□□ 2.6
BRPF1P55201 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
BRPF1P55201 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.31■■■□□ 2.6
BRPF1P55201 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.31■■■□□ 2.6
BRPF1P55201 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.31■■■□□ 2.6
BRPF1P55201 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.31■■■□□ 2.6
BRPF1P55201 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
BRPF1P55201 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
BRPF1P55201 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BRPF1P55201 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
BRPF1P55201 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
BRPF1P55201 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.29■■■□□ 2.6
BRPF1P55201 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
BRPF1P55201 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
BRPF1P55201 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.28■■■□□ 2.6
BRPF1P55201 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.28■■■□□ 2.6
BRPF1P55201 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms