Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.8■■□□□ 1.24
HCN1O60741 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
HCN1O60741 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.79■■□□□ 1.24
HCN1O60741 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
HCN1O60741 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HCN1O60741 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
HCN1O60741 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
HCN1O60741 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.78■■□□□ 1.24
HCN1O60741 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCN1O60741 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HCN1O60741 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HCN1O60741 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
HCN1O60741 AC126177.7-201ENST00000547904 679 ntBASIC22.78■■□□□ 1.24
HCN1O60741 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCN1O60741 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
HCN1O60741 AC060814.1-201ENST00000554326 538 ntBASIC22.77■■□□□ 1.24
HCN1O60741 ABHD17AP5-201ENST00000580133 923 ntBASIC22.77■■□□□ 1.24
HCN1O60741 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HCN1O60741 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
HCN1O60741 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
HCN1O60741 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
HCN1O60741 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
HCN1O60741 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.76■■□□□ 1.23
HCN1O60741 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.75■■□□□ 1.23
HCN1O60741 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
HCN1O60741 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HCN1O60741 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
HCN1O60741 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HCN1O60741 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HCN1O60741 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HCN1O60741 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCN1O60741 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
HCN1O60741 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.73■■□□□ 1.23
HCN1O60741 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.73■■□□□ 1.23
HCN1O60741 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCN1O60741 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.73■■□□□ 1.23
HCN1O60741 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.73■■□□□ 1.23
HCN1O60741 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
HCN1O60741 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.72■■□□□ 1.23
HCN1O60741 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HCN1O60741 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
HCN1O60741 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HCN1O60741 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HCN1O60741 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
HCN1O60741 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
HCN1O60741 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
HCN1O60741 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
HCN1O60741 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
HCN1O60741 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
HCN1O60741 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
HCN1O60741 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HCN1O60741 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCN1O60741 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCN1O60741 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HCN1O60741 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.69■■□□□ 1.22
HCN1O60741 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HCN1O60741 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HCN1O60741 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
HCN1O60741 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
HCN1O60741 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.67■■□□□ 1.22
HCN1O60741 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCN1O60741 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HCN1O60741 AC092296.2-201ENST00000589470 999 ntBASIC22.67■■□□□ 1.22
HCN1O60741 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.66■■□□□ 1.22
HCN1O60741 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HCN1O60741 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HCN1O60741 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.66■■□□□ 1.22
HCN1O60741 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
HCN1O60741 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.66■■□□□ 1.22
HCN1O60741 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
HCN1O60741 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCN1O60741 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.65■■□□□ 1.22
HCN1O60741 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCN1O60741 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCN1O60741 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCN1O60741 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HCN1O60741 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HCN1O60741 ECEL1P2-201ENST00000461596 1295 ntBASIC22.64■■□□□ 1.21
HCN1O60741 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.64■■□□□ 1.21
HCN1O60741 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HCN1O60741 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.64■■□□□ 1.21
HCN1O60741 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HCN1O60741 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HCN1O60741 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.63■■□□□ 1.21
HCN1O60741 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HCN1O60741 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HCN1O60741 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HCN1O60741 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HCN1O60741 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.61■■□□□ 1.21
HCN1O60741 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HCN1O60741 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
HCN1O60741 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.61■■□□□ 1.21
HCN1O60741 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.61■■□□□ 1.21
HCN1O60741 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HCN1O60741 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HCN1O60741 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.6■■□□□ 1.21
HCN1O60741 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HCN1O60741 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HCN1O60741 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HCN1O60741 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms