Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAI2O43623 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAI2O43623 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.12■□□□□ 0.49
SNAI2O43623 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAI2O43623 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI2O43623 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI2O43623 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNAI2O43623 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SNAI2O43623 AC005559.1-201ENST00000589661 871 ntBASIC18.11■□□□□ 0.49
SNAI2O43623 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNAI2O43623 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAI2O43623 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.11■□□□□ 0.49
SNAI2O43623 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNAI2O43623 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI2O43623 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI2O43623 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAI2O43623 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAI2O43623 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAI2O43623 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.09■□□□□ 0.49
SNAI2O43623 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAI2O43623 AC142472.1-201ENST00000612013 1741 ntBASIC18.09■□□□□ 0.49
SNAI2O43623 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAI2O43623 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SNAI2O43623 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNAI2O43623 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNAI2O43623 MIR6090-201ENST00000622481 60 ntBASIC18.08■□□□□ 0.48
SNAI2O43623 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.08■□□□□ 0.48
SNAI2O43623 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.08■□□□□ 0.48
SNAI2O43623 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI2O43623 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNAI2O43623 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.07■□□□□ 0.48
SNAI2O43623 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.06■□□□□ 0.48
SNAI2O43623 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SNAI2O43623 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI2O43623 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SNAI2O43623 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.05■□□□□ 0.48
SNAI2O43623 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI2O43623 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNAI2O43623 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNAI2O43623 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SNAI2O43623 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SNAI2O43623 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.04■□□□□ 0.48
SNAI2O43623 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.04■□□□□ 0.48
SNAI2O43623 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.04■□□□□ 0.48
SNAI2O43623 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNAI2O43623 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.03■□□□□ 0.48
SNAI2O43623 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SNAI2O43623 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI2O43623 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI2O43623 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.03■□□□□ 0.48
SNAI2O43623 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNAI2O43623 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.02■□□□□ 0.48
SNAI2O43623 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SNAI2O43623 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.01■□□□□ 0.47
SNAI2O43623 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SNAI2O43623 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI2O43623 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.01■□□□□ 0.47
SNAI2O43623 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SNAI2O43623 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.01■□□□□ 0.47
SNAI2O43623 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.01■□□□□ 0.47
SNAI2O43623 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms