Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.45■■□□□ 1.35
RTCAO00442 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.45■■□□□ 1.35
RTCAO00442 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RTCAO00442 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.45■■□□□ 1.34
RTCAO00442 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.45■■□□□ 1.34
RTCAO00442 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RTCAO00442 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.44■■□□□ 1.34
RTCAO00442 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RTCAO00442 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.44■■□□□ 1.34
RTCAO00442 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.43■■□□□ 1.34
RTCAO00442 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RTCAO00442 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.42■■□□□ 1.34
RTCAO00442 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.42■■□□□ 1.34
RTCAO00442 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.42■■□□□ 1.34
RTCAO00442 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCAO00442 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
RTCAO00442 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCAO00442 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCAO00442 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RTCAO00442 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
RTCAO00442 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RTCAO00442 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.41■■□□□ 1.34
RTCAO00442 AC126177.7-201ENST00000547904 679 ntBASIC23.41■■□□□ 1.34
RTCAO00442 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.41■■□□□ 1.34
RTCAO00442 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTCAO00442 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RTCAO00442 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCAO00442 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RTCAO00442 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.4■■□□□ 1.34
RTCAO00442 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RTCAO00442 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
RTCAO00442 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RTCAO00442 AL359504.2-201ENST00000605506 1601 ntBASIC23.39■■□□□ 1.33
RTCAO00442 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.38■■□□□ 1.33
RTCAO00442 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.38■■□□□ 1.33
RTCAO00442 AC060814.1-201ENST00000554326 538 ntBASIC23.38■■□□□ 1.33
RTCAO00442 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCAO00442 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCAO00442 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCAO00442 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCAO00442 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCAO00442 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCAO00442 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.36■■□□□ 1.33
RTCAO00442 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCAO00442 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.35■■□□□ 1.33
RTCAO00442 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCAO00442 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCAO00442 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCAO00442 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCAO00442 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.35■■□□□ 1.33
RTCAO00442 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.35■■□□□ 1.33
RTCAO00442 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCAO00442 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCAO00442 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.34■■□□□ 1.33
RTCAO00442 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.34■■□□□ 1.33
RTCAO00442 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RTCAO00442 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.33■■□□□ 1.33
RTCAO00442 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTCAO00442 AL157400.5-201ENST00000507624 621 ntBASIC23.33■■□□□ 1.33
RTCAO00442 AC022413.1-201ENST00000624602 984 ntBASIC23.33■■□□□ 1.33
RTCAO00442 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RTCAO00442 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTCAO00442 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTCAO00442 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTCAO00442 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RTCAO00442 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RTCAO00442 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.32■■□□□ 1.32
RTCAO00442 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.31■■□□□ 1.32
RTCAO00442 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RTCAO00442 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
RTCAO00442 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RTCAO00442 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTCAO00442 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.3■■□□□ 1.32
RTCAO00442 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.3■■□□□ 1.32
RTCAO00442 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTCAO00442 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RTCAO00442 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RTCAO00442 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.3■■□□□ 1.32
RTCAO00442 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
RTCAO00442 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTCAO00442 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTCAO00442 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
RTCAO00442 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RTCAO00442 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
RTCAO00442 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RTCAO00442 AC091060.1-201ENST00000623524 1766 ntBASIC23.29■■□□□ 1.32
RTCAO00442 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.28■■□□□ 1.32
RTCAO00442 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCAO00442 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RTCAO00442 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RTCAO00442 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCAO00442 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RTCAO00442 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RTCAO00442 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms