Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 ABHD17AP4-201ENST00000411545 909 ntBASIC19.54■□□□□ 0.72
CGB1A6NKQ9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 DUSP8P4-201ENST00000399538 1761 ntBASIC19.54■□□□□ 0.72
CGB1A6NKQ9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CGB1A6NKQ9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 CR559946.2-201ENST00000623684 991 ntBASIC19.53■□□□□ 0.72
CGB1A6NKQ9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.53■□□□□ 0.72
CGB1A6NKQ9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CGB1A6NKQ9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CGB1A6NKQ9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CGB1A6NKQ9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.52■□□□□ 0.72
CGB1A6NKQ9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CGB1A6NKQ9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CGB1A6NKQ9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CGB1A6NKQ9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CGB1A6NKQ9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CGB1A6NKQ9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CGB1A6NKQ9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CGB1A6NKQ9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CGB1A6NKQ9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.49■□□□□ 0.71
CGB1A6NKQ9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CGB1A6NKQ9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CGB1A6NKQ9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CGB1A6NKQ9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CGB1A6NKQ9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CGB1A6NKQ9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CGB1A6NKQ9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.47■□□□□ 0.71
CGB1A6NKQ9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CGB1A6NKQ9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.46■□□□□ 0.71
CGB1A6NKQ9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.46■□□□□ 0.71
CGB1A6NKQ9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CGB1A6NKQ9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 MIR3648-2-201ENST00000581792 180 ntBASIC19.44■□□□□ 0.7
CGB1A6NKQ9 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 MIR3648-1-201ENST00000615959 180 ntBASIC19.44■□□□□ 0.7
CGB1A6NKQ9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.44■□□□□ 0.7
CGB1A6NKQ9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms