Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.71■■■□□ 2.51
PNMA6EA0A0J9YXQ4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PNMA6EA0A0J9YXQ4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PNMA6EA0A0J9YXQ4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.7■■■□□ 2.51
PNMA6EA0A0J9YXQ4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.7■■■□□ 2.51
PNMA6EA0A0J9YXQ4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.7■■■□□ 2.51
PNMA6EA0A0J9YXQ4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PNMA6EA0A0J9YXQ4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.69■■■□□ 2.5
PNMA6EA0A0J9YXQ4 RNF126P1-201ENST00000567452 1320 ntBASIC30.69■■■□□ 2.5
PNMA6EA0A0J9YXQ4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PNMA6EA0A0J9YXQ4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.69■■■□□ 2.5
PNMA6EA0A0J9YXQ4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PNMA6EA0A0J9YXQ4 AC142472.1-201ENST00000612013 1741 ntBASIC30.67■■■□□ 2.5
PNMA6EA0A0J9YXQ4 ECEL1P2-201ENST00000461596 1295 ntBASIC30.67■■■□□ 2.5
PNMA6EA0A0J9YXQ4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.67■■■□□ 2.5
PNMA6EA0A0J9YXQ4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.67■■■□□ 2.5
PNMA6EA0A0J9YXQ4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PNMA6EA0A0J9YXQ4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
PNMA6EA0A0J9YXQ4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.66■■■□□ 2.5
PNMA6EA0A0J9YXQ4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.66■■■□□ 2.5
PNMA6EA0A0J9YXQ4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
PNMA6EA0A0J9YXQ4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
PNMA6EA0A0J9YXQ4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PNMA6EA0A0J9YXQ4 AC025884.2-201ENST00000553429 711 ntBASIC30.64■■■□□ 2.5
PNMA6EA0A0J9YXQ4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
PNMA6EA0A0J9YXQ4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.64■■■□□ 2.49
PNMA6EA0A0J9YXQ4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
PNMA6EA0A0J9YXQ4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PNMA6EA0A0J9YXQ4 RARRES2P2-201ENST00000394842 485 ntBASIC30.63■■■□□ 2.49
PNMA6EA0A0J9YXQ4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
PNMA6EA0A0J9YXQ4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PNMA6EA0A0J9YXQ4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PNMA6EA0A0J9YXQ4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.62■■■□□ 2.49
PNMA6EA0A0J9YXQ4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.62■■■□□ 2.49
PNMA6EA0A0J9YXQ4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PNMA6EA0A0J9YXQ4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PNMA6EA0A0J9YXQ4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
PNMA6EA0A0J9YXQ4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PNMA6EA0A0J9YXQ4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PNMA6EA0A0J9YXQ4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.6■■■□□ 2.49
PNMA6EA0A0J9YXQ4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PNMA6EA0A0J9YXQ4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
PNMA6EA0A0J9YXQ4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.6■■■□□ 2.49
PNMA6EA0A0J9YXQ4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.59■■■□□ 2.49
PNMA6EA0A0J9YXQ4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PNMA6EA0A0J9YXQ4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.59■■■□□ 2.49
PNMA6EA0A0J9YXQ4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.59■■■□□ 2.49
PNMA6EA0A0J9YXQ4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC30.59■■■□□ 2.49
PNMA6EA0A0J9YXQ4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PNMA6EA0A0J9YXQ4 SMPD5-203ENST00000639008 1464 ntBASIC30.58■■■□□ 2.49
PNMA6EA0A0J9YXQ4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
PNMA6EA0A0J9YXQ4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.57■■■□□ 2.49
PNMA6EA0A0J9YXQ4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PNMA6EA0A0J9YXQ4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
PNMA6EA0A0J9YXQ4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.57■■■□□ 2.48
PNMA6EA0A0J9YXQ4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.57■■■□□ 2.48
PNMA6EA0A0J9YXQ4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PNMA6EA0A0J9YXQ4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6EA0A0J9YXQ4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
PNMA6EA0A0J9YXQ4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PNMA6EA0A0J9YXQ4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.55■■■□□ 2.48
PNMA6EA0A0J9YXQ4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PNMA6EA0A0J9YXQ4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
PNMA6EA0A0J9YXQ4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PNMA6EA0A0J9YXQ4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PNMA6EA0A0J9YXQ4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.53■■■□□ 2.48
PNMA6EA0A0J9YXQ4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PNMA6EA0A0J9YXQ4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
PNMA6EA0A0J9YXQ4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.52■■■□□ 2.48
PNMA6EA0A0J9YXQ4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
PNMA6EA0A0J9YXQ4 AC007029.1-201ENST00000604183 313 ntBASIC30.51■■■□□ 2.47
PNMA6EA0A0J9YXQ4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
PNMA6EA0A0J9YXQ4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
PNMA6EA0A0J9YXQ4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.5■■■□□ 2.47
PNMA6EA0A0J9YXQ4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PNMA6EA0A0J9YXQ4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PNMA6EA0A0J9YXQ4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
PNMA6EA0A0J9YXQ4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PNMA6EA0A0J9YXQ4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
PNMA6EA0A0J9YXQ4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
PNMA6EA0A0J9YXQ4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.48■■■□□ 2.47
PNMA6EA0A0J9YXQ4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PNMA6EA0A0J9YXQ4 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.47■■■□□ 2.47
PNMA6EA0A0J9YXQ4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms