Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
POPDC3Q9HBV1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.39■■□□□ 1.5
POPDC3Q9HBV1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
POPDC3Q9HBV1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
POPDC3Q9HBV1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
POPDC3Q9HBV1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.37■■□□□ 1.49
POPDC3Q9HBV1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
POPDC3Q9HBV1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
POPDC3Q9HBV1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.36■■□□□ 1.49
POPDC3Q9HBV1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
POPDC3Q9HBV1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 MIR219A2-201ENST00000608502 1504 ntBASIC24.35■■□□□ 1.49
POPDC3Q9HBV1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
POPDC3Q9HBV1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
POPDC3Q9HBV1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.34■■□□□ 1.49
POPDC3Q9HBV1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
POPDC3Q9HBV1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 AC092803.2-201ENST00000564287 1899 ntBASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.33■■□□□ 1.49
POPDC3Q9HBV1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
POPDC3Q9HBV1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.31■■□□□ 1.48
POPDC3Q9HBV1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
POPDC3Q9HBV1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.3■■□□□ 1.48
POPDC3Q9HBV1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.3■■□□□ 1.48
POPDC3Q9HBV1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.3■■□□□ 1.48
POPDC3Q9HBV1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.3■■□□□ 1.48
POPDC3Q9HBV1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
POPDC3Q9HBV1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
POPDC3Q9HBV1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
POPDC3Q9HBV1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
POPDC3Q9HBV1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
POPDC3Q9HBV1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
POPDC3Q9HBV1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
POPDC3Q9HBV1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
POPDC3Q9HBV1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
POPDC3Q9HBV1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
POPDC3Q9HBV1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 HLA-V-202ENST00000446817 847 ntBASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.27■■□□□ 1.48
POPDC3Q9HBV1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
POPDC3Q9HBV1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
POPDC3Q9HBV1 ABHD17AP4-201ENST00000411545 909 ntBASIC24.26■■□□□ 1.47
POPDC3Q9HBV1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.26■■□□□ 1.47
POPDC3Q9HBV1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.26■■□□□ 1.47
POPDC3Q9HBV1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
POPDC3Q9HBV1 CR559946.2-201ENST00000623684 991 ntBASIC24.25■■□□□ 1.47
POPDC3Q9HBV1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
POPDC3Q9HBV1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
POPDC3Q9HBV1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
POPDC3Q9HBV1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
POPDC3Q9HBV1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
POPDC3Q9HBV1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
POPDC3Q9HBV1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms