Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.28■■□□□ 1
HIST1H2AAQ96QV6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.27■■□□□ 1
HIST1H2AAQ96QV6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
HIST1H2AAQ96QV6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.26■□□□□ 0.99
HIST1H2AAQ96QV6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.26■□□□□ 0.99
HIST1H2AAQ96QV6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H2AAQ96QV6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H2AAQ96QV6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIST1H2AAQ96QV6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.24■□□□□ 0.99
HIST1H2AAQ96QV6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST1H2AAQ96QV6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.23■□□□□ 0.99
HIST1H2AAQ96QV6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H2AAQ96QV6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIST1H2AAQ96QV6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 AL449106.1-201ENST00000608517 1980 ntBASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
HIST1H2AAQ96QV6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.21■□□□□ 0.99
HIST1H2AAQ96QV6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HIST1H2AAQ96QV6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.21■□□□□ 0.99
HIST1H2AAQ96QV6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIST1H2AAQ96QV6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIST1H2AAQ96QV6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HIST1H2AAQ96QV6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H2AAQ96QV6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HIST1H2AAQ96QV6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIST1H2AAQ96QV6 AP004609.3-201ENST00000610705 1884 ntBASIC21.2■□□□□ 0.98
HIST1H2AAQ96QV6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 AC148477.6-201ENST00000623746 465 ntBASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIST1H2AAQ96QV6 MIR219A2-201ENST00000608502 1504 ntBASIC21.18■□□□□ 0.98
HIST1H2AAQ96QV6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.18■□□□□ 0.98
HIST1H2AAQ96QV6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST1H2AAQ96QV6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 MIR3648-2-201ENST00000581792 180 ntBASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 MIR3648-1-201ENST00000615959 180 ntBASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 CR559946.2-201ENST00000623684 991 ntBASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.17■□□□□ 0.98
HIST1H2AAQ96QV6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H2AAQ96QV6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2AAQ96QV6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2AAQ96QV6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2AAQ96QV6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2AAQ96QV6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HIST1H2AAQ96QV6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 MIR7108-201ENST00000614319 87 ntBASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2AAQ96QV6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 HLA-V-202ENST00000446817 847 ntBASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2AAQ96QV6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2AAQ96QV6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms