Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH15Q96QU1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH15Q96QU1 PVT1_1.1-201ENST00000615125 194 ntBASIC24.55■■□□□ 1.52
PCDH15Q96QU1 KRT8P33-201ENST00000508125 1423 ntBASIC24.54■■□□□ 1.52
PCDH15Q96QU1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH15Q96QU1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PCDH15Q96QU1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH15Q96QU1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDH15Q96QU1 ABCB10P1-201ENST00000614297 2181 ntBASIC24.53■■□□□ 1.52
PCDH15Q96QU1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH15Q96QU1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.53■■□□□ 1.52
PCDH15Q96QU1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDH15Q96QU1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDH15Q96QU1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PCDH15Q96QU1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH15Q96QU1 MIR6765-201ENST00000614092 87 ntBASIC24.51■■□□□ 1.51
PCDH15Q96QU1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH15Q96QU1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH15Q96QU1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH15Q96QU1 MIR4508-201ENST00000584178 70 ntBASIC24.51■■□□□ 1.51
PCDH15Q96QU1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PCDH15Q96QU1 AC074183.2-201ENST00000623112 922 ntBASIC24.5■■□□□ 1.51
PCDH15Q96QU1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH15Q96QU1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDH15Q96QU1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDH15Q96QU1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH15Q96QU1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.49■■□□□ 1.51
PCDH15Q96QU1 AC139795.1-202ENST00000500444 432 ntBASIC24.49■■□□□ 1.51
PCDH15Q96QU1 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH15Q96QU1 GUSBP5-201ENST00000418136 578 ntBASIC24.48■■□□□ 1.51
PCDH15Q96QU1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.48■■□□□ 1.51
PCDH15Q96QU1 AC103834.1-201ENST00000520383 144 ntBASIC24.48■■□□□ 1.51
PCDH15Q96QU1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH15Q96QU1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH15Q96QU1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH15Q96QU1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH15Q96QU1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH15Q96QU1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 MIR3960-201ENST00000583311 91 ntBASIC24.46■■□□□ 1.51
PCDH15Q96QU1 AC131212.1-201ENST00000613771 668 ntBASIC24.46■■□□□ 1.51
PCDH15Q96QU1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH15Q96QU1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDH15Q96QU1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDH15Q96QU1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.51
PCDH15Q96QU1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH15Q96QU1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH15Q96QU1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH15Q96QU1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDH15Q96QU1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
PCDH15Q96QU1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
PCDH15Q96QU1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 AC103724.3-201ENST00000564481 992 ntBASIC24.44■■□□□ 1.5
PCDH15Q96QU1 BHLHE23-202ENST00000612929 1109 ntBASIC24.44■■□□□ 1.5
PCDH15Q96QU1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH15Q96QU1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PCDH15Q96QU1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH15Q96QU1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH15Q96QU1 ABCB10P3-201ENST00000561950 2166 ntBASIC24.41■■□□□ 1.5
PCDH15Q96QU1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH15Q96QU1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDH15Q96QU1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDH15Q96QU1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH15Q96QU1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH15Q96QU1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH15Q96QU1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDH15Q96QU1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PCDH15Q96QU1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH15Q96QU1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH15Q96QU1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH15Q96QU1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDH15Q96QU1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH15Q96QU1 YBX1P4-201ENST00000392794 808 ntBASIC24.38■■□□□ 1.49
PCDH15Q96QU1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH15Q96QU1 AL139393.2-201ENST00000608721 2025 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms