Protein–RNA interactions for Protein: Q96MT7

CFAP44, Cilia- and flagella-associated protein 44, humanhuman

Predictions only

Length 982 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP44Q96MT7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
CFAP44Q96MT7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CFAP44Q96MT7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CFAP44Q96MT7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.28■■■□□ 2.76
CFAP44Q96MT7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
CFAP44Q96MT7 ECEL1P2-201ENST00000461596 1295 ntBASIC32.28■■■□□ 2.76
CFAP44Q96MT7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CFAP44Q96MT7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CFAP44Q96MT7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC32.27■■■□□ 2.76
CFAP44Q96MT7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.27■■■□□ 2.76
CFAP44Q96MT7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CFAP44Q96MT7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CFAP44Q96MT7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CFAP44Q96MT7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CFAP44Q96MT7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.24■■■□□ 2.75
CFAP44Q96MT7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
CFAP44Q96MT7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CFAP44Q96MT7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.23■■■□□ 2.75
CFAP44Q96MT7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.22■■■□□ 2.75
CFAP44Q96MT7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.22■■■□□ 2.75
CFAP44Q96MT7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CFAP44Q96MT7 AL449106.1-201ENST00000608517 1980 ntBASIC32.21■■■□□ 2.75
CFAP44Q96MT7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CFAP44Q96MT7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CFAP44Q96MT7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CFAP44Q96MT7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.2■■■□□ 2.75
CFAP44Q96MT7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.2■■■□□ 2.75
CFAP44Q96MT7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
CFAP44Q96MT7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP44Q96MT7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP44Q96MT7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP44Q96MT7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP44Q96MT7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.18■■■□□ 2.74
CFAP44Q96MT7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP44Q96MT7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP44Q96MT7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP44Q96MT7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP44Q96MT7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.17■■■□□ 2.74
CFAP44Q96MT7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP44Q96MT7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP44Q96MT7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP44Q96MT7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 AC025884.2-201ENST00000553429 711 ntBASIC32.15■■■□□ 2.74
CFAP44Q96MT7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP44Q96MT7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.14■■■□□ 2.74
CFAP44Q96MT7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC32.14■■■□□ 2.74
CFAP44Q96MT7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.14■■■□□ 2.74
CFAP44Q96MT7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
CFAP44Q96MT7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CFAP44Q96MT7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CFAP44Q96MT7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CFAP44Q96MT7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CFAP44Q96MT7 AL359504.2-201ENST00000605506 1601 ntBASIC32.11■■■□□ 2.73
CFAP44Q96MT7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP44Q96MT7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP44Q96MT7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.11■■■□□ 2.73
CFAP44Q96MT7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CFAP44Q96MT7 SMPD5-203ENST00000639008 1464 ntBASIC32.1■■■□□ 2.73
CFAP44Q96MT7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.1■■■□□ 2.73
CFAP44Q96MT7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
CFAP44Q96MT7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CFAP44Q96MT7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.09■■■□□ 2.73
CFAP44Q96MT7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP44Q96MT7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP44Q96MT7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC32.08■■■□□ 2.73
CFAP44Q96MT7 ABHD17AP5-201ENST00000580133 923 ntBASIC32.08■■■□□ 2.73
CFAP44Q96MT7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CFAP44Q96MT7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC32.08■■■□□ 2.73
CFAP44Q96MT7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CFAP44Q96MT7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CFAP44Q96MT7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CFAP44Q96MT7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.06■■■□□ 2.72
CFAP44Q96MT7 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.06■■■□□ 2.72
CFAP44Q96MT7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
CFAP44Q96MT7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.05■■■□□ 2.72
CFAP44Q96MT7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.05■■■□□ 2.72
CFAP44Q96MT7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.05■■■□□ 2.72
CFAP44Q96MT7 AC007029.1-201ENST00000604183 313 ntBASIC32.05■■■□□ 2.72
CFAP44Q96MT7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.04■■■□□ 2.72
CFAP44Q96MT7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
CFAP44Q96MT7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
CFAP44Q96MT7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC32.01■■■□□ 2.72
CFAP44Q96MT7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
CFAP44Q96MT7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.01■■■□□ 2.71
CFAP44Q96MT7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
CFAP44Q96MT7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CFAP44Q96MT7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32■■■□□ 2.71
CFAP44Q96MT7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
CFAP44Q96MT7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
CFAP44Q96MT7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
CFAP44Q96MT7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CFAP44Q96MT7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.99■■■□□ 2.71
CFAP44Q96MT7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
CFAP44Q96MT7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CFAP44Q96MT7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms