Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.25■□□□□ 0.99
CPNE2Q96FN4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CPNE2Q96FN4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CPNE2Q96FN4 AC091060.1-201ENST00000623524 1766 ntBASIC21.25■□□□□ 0.99
CPNE2Q96FN4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CPNE2Q96FN4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE2Q96FN4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE2Q96FN4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.24■□□□□ 0.99
CPNE2Q96FN4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.24■□□□□ 0.99
CPNE2Q96FN4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CPNE2Q96FN4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CPNE2Q96FN4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 WHAMMP3-201ENST00000611636 1609 ntBASIC21.22■□□□□ 0.99
CPNE2Q96FN4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 AC021231.2-201ENST00000594613 730 ntBASIC21.22■□□□□ 0.99
CPNE2Q96FN4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CPNE2Q96FN4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE2Q96FN4 AC142472.1-201ENST00000612013 1741 ntBASIC21.21■□□□□ 0.99
CPNE2Q96FN4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.21■□□□□ 0.99
CPNE2Q96FN4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE2Q96FN4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE2Q96FN4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.21■□□□□ 0.99
CPNE2Q96FN4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CPNE2Q96FN4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CPNE2Q96FN4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CPNE2Q96FN4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CPNE2Q96FN4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE2Q96FN4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE2Q96FN4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CPNE2Q96FN4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE2Q96FN4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.19■□□□□ 0.98
CPNE2Q96FN4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPNE2Q96FN4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPNE2Q96FN4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE2Q96FN4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPNE2Q96FN4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CPNE2Q96FN4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.17■□□□□ 0.98
CPNE2Q96FN4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE2Q96FN4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPNE2Q96FN4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.16■□□□□ 0.98
CPNE2Q96FN4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.16■□□□□ 0.98
CPNE2Q96FN4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.16■□□□□ 0.98
CPNE2Q96FN4 AC092803.2-201ENST00000564287 1899 ntBASIC21.15■□□□□ 0.98
CPNE2Q96FN4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE2Q96FN4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE2Q96FN4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CPNE2Q96FN4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE2Q96FN4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE2Q96FN4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE2Q96FN4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE2Q96FN4 DUSP8P4-201ENST00000399538 1761 ntBASIC21.13■□□□□ 0.97
CPNE2Q96FN4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE2Q96FN4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE2Q96FN4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CPNE2Q96FN4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE2Q96FN4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE2Q96FN4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE2Q96FN4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CPNE2Q96FN4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE2Q96FN4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE2Q96FN4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE2Q96FN4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CPNE2Q96FN4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE2Q96FN4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE2Q96FN4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE2Q96FN4 LINC01971-201ENST00000617888 1048 ntBASIC21.11■□□□□ 0.97
CPNE2Q96FN4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE2Q96FN4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE2Q96FN4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE2Q96FN4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE2Q96FN4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE2Q96FN4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE2Q96FN4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE2Q96FN4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE2Q96FN4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE2Q96FN4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE2Q96FN4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE2Q96FN4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE2Q96FN4 AC008813.1-201ENST00000536597 885 ntBASIC21.08■□□□□ 0.97
CPNE2Q96FN4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE2Q96FN4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CPNE2Q96FN4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE2Q96FN4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE2Q96FN4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE2Q96FN4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
CPNE2Q96FN4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE2Q96FN4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CPNE2Q96FN4 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms