Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
SMARCC2Q8TAQ2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SMARCC2Q8TAQ2 AL449106.1-201ENST00000608517 1980 ntBASIC29.06■■■□□ 2.24
SMARCC2Q8TAQ2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
SMARCC2Q8TAQ2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
SMARCC2Q8TAQ2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.05■■■□□ 2.24
SMARCC2Q8TAQ2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
SMARCC2Q8TAQ2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.04■■■□□ 2.24
SMARCC2Q8TAQ2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SMARCC2Q8TAQ2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
SMARCC2Q8TAQ2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
SMARCC2Q8TAQ2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
SMARCC2Q8TAQ2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
SMARCC2Q8TAQ2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.02■■■□□ 2.24
SMARCC2Q8TAQ2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.02■■■□□ 2.24
SMARCC2Q8TAQ2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.02■■■□□ 2.24
SMARCC2Q8TAQ2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.01■■■□□ 2.23
SMARCC2Q8TAQ2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMARCC2Q8TAQ2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29■■■□□ 2.23
SMARCC2Q8TAQ2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SMARCC2Q8TAQ2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
SMARCC2Q8TAQ2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SMARCC2Q8TAQ2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.99■■■□□ 2.23
SMARCC2Q8TAQ2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
SMARCC2Q8TAQ2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
SMARCC2Q8TAQ2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SMARCC2Q8TAQ2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.98■■■□□ 2.23
SMARCC2Q8TAQ2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 AC148477.6-201ENST00000623746 465 ntBASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SMARCC2Q8TAQ2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SMARCC2Q8TAQ2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SMARCC2Q8TAQ2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SMARCC2Q8TAQ2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.23
SMARCC2Q8TAQ2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SMARCC2Q8TAQ2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 WHAMMP3-201ENST00000611636 1609 ntBASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.94■■■□□ 2.22
SMARCC2Q8TAQ2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
SMARCC2Q8TAQ2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SMARCC2Q8TAQ2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.93■■■□□ 2.22
SMARCC2Q8TAQ2 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SMARCC2Q8TAQ2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SMARCC2Q8TAQ2 MIR219A2-201ENST00000608502 1504 ntBASIC28.92■■■□□ 2.22
SMARCC2Q8TAQ2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.92■■■□□ 2.22
SMARCC2Q8TAQ2 AP004609.3-201ENST00000610705 1884 ntBASIC28.91■■■□□ 2.22
SMARCC2Q8TAQ2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.91■■■□□ 2.22
SMARCC2Q8TAQ2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SMARCC2Q8TAQ2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.91■■■□□ 2.22
SMARCC2Q8TAQ2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SMARCC2Q8TAQ2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SMARCC2Q8TAQ2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMARCC2Q8TAQ2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SMARCC2Q8TAQ2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.9■■■□□ 2.22
SMARCC2Q8TAQ2 HSD17B1P1-201ENST00000590052 955 ntBASIC28.9■■■□□ 2.22
SMARCC2Q8TAQ2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.9■■■□□ 2.22
SMARCC2Q8TAQ2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
SMARCC2Q8TAQ2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMARCC2Q8TAQ2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
SMARCC2Q8TAQ2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SMARCC2Q8TAQ2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.88■■■□□ 2.21
SMARCC2Q8TAQ2 AC091060.1-201ENST00000623524 1766 ntBASIC28.88■■■□□ 2.21
SMARCC2Q8TAQ2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.88■■■□□ 2.21
SMARCC2Q8TAQ2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMARCC2Q8TAQ2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
SMARCC2Q8TAQ2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
SMARCC2Q8TAQ2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SMARCC2Q8TAQ2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SMARCC2Q8TAQ2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.86■■■□□ 2.21
SMARCC2Q8TAQ2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SMARCC2Q8TAQ2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.85■■■□□ 2.21
SMARCC2Q8TAQ2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SMARCC2Q8TAQ2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.85■■■□□ 2.21
SMARCC2Q8TAQ2 AC142472.1-201ENST00000612013 1741 ntBASIC28.85■■■□□ 2.21
SMARCC2Q8TAQ2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
SMARCC2Q8TAQ2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.84■■■□□ 2.21
SMARCC2Q8TAQ2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms