Protein–RNA interactions for Protein: Q8NE00

TMEM104, Transmembrane protein 104, humanhuman

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM104Q8NE00 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM104Q8NE00 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM104Q8NE00 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM104Q8NE00 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM104Q8NE00 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEM104Q8NE00 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 AC142472.1-201ENST00000612013 1741 ntBASIC21.07■□□□□ 0.96
TMEM104Q8NE00 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEM104Q8NE00 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM104Q8NE00 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEM104Q8NE00 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM104Q8NE00 WHAMMP3-201ENST00000611636 1609 ntBASIC21.06■□□□□ 0.96
TMEM104Q8NE00 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEM104Q8NE00 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM104Q8NE00 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM104Q8NE00 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM104Q8NE00 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM104Q8NE00 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEM104Q8NE00 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.04■□□□□ 0.96
TMEM104Q8NE00 AC044849.2-201ENST00000606596 710 ntBASIC21.04■□□□□ 0.96
TMEM104Q8NE00 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEM104Q8NE00 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM104Q8NE00 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM104Q8NE00 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TMEM104Q8NE00 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM104Q8NE00 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM104Q8NE00 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM104Q8NE00 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TMEM104Q8NE00 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM104Q8NE00 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM104Q8NE00 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TMEM104Q8NE00 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TMEM104Q8NE00 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM104Q8NE00 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21■□□□□ 0.95
TMEM104Q8NE00 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 AC021231.2-201ENST00000594613 730 ntBASIC21■□□□□ 0.95
TMEM104Q8NE00 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM104Q8NE00 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21■□□□□ 0.95
TMEM104Q8NE00 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEM104Q8NE00 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEM104Q8NE00 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEM104Q8NE00 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM104Q8NE00 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TMEM104Q8NE00 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM104Q8NE00 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM104Q8NE00 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMEM104Q8NE00 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 RPS2P35-201ENST00000443417 897 ntBASIC20.95■□□□□ 0.94
TMEM104Q8NE00 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
TMEM104Q8NE00 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms