Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
SMC5Q8IY18 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
SMC5Q8IY18 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
SMC5Q8IY18 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
SMC5Q8IY18 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.78■■■□□ 2.52
SMC5Q8IY18 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.78■■■□□ 2.52
SMC5Q8IY18 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
SMC5Q8IY18 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.77■■■□□ 2.52
SMC5Q8IY18 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
SMC5Q8IY18 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
SMC5Q8IY18 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
SMC5Q8IY18 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.76■■■□□ 2.52
SMC5Q8IY18 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.76■■■□□ 2.52
SMC5Q8IY18 AC008813.1-201ENST00000536597 885 ntBASIC30.76■■■□□ 2.51
SMC5Q8IY18 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SMC5Q8IY18 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SMC5Q8IY18 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.76■■■□□ 2.51
SMC5Q8IY18 AC145676.1-201ENST00000514988 2004 ntBASIC30.75■■■□□ 2.51
SMC5Q8IY18 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SMC5Q8IY18 AC148477.6-201ENST00000623746 465 ntBASIC30.75■■■□□ 2.51
SMC5Q8IY18 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SMC5Q8IY18 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SMC5Q8IY18 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
SMC5Q8IY18 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMC5Q8IY18 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMC5Q8IY18 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMC5Q8IY18 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
SMC5Q8IY18 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SMC5Q8IY18 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.73■■■□□ 2.51
SMC5Q8IY18 MIR219A2-201ENST00000608502 1504 ntBASIC30.73■■■□□ 2.51
SMC5Q8IY18 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
SMC5Q8IY18 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.72■■■□□ 2.51
SMC5Q8IY18 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMC5Q8IY18 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.72■■■□□ 2.51
SMC5Q8IY18 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.72■■■□□ 2.51
SMC5Q8IY18 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
SMC5Q8IY18 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
SMC5Q8IY18 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
SMC5Q8IY18 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMC5Q8IY18 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SMC5Q8IY18 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SMC5Q8IY18 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SMC5Q8IY18 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SMC5Q8IY18 AC092803.2-201ENST00000564287 1899 ntBASIC30.7■■■□□ 2.51
SMC5Q8IY18 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
SMC5Q8IY18 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SMC5Q8IY18 HLA-V-202ENST00000446817 847 ntBASIC30.69■■■□□ 2.5
SMC5Q8IY18 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SMC5Q8IY18 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
SMC5Q8IY18 DUSP8P4-201ENST00000399538 1761 ntBASIC30.69■■■□□ 2.5
SMC5Q8IY18 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMC5Q8IY18 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SMC5Q8IY18 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
SMC5Q8IY18 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMC5Q8IY18 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMC5Q8IY18 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SMC5Q8IY18 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMC5Q8IY18 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SMC5Q8IY18 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMC5Q8IY18 ABHD17AP4-201ENST00000411545 909 ntBASIC30.66■■■□□ 2.5
SMC5Q8IY18 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.66■■■□□ 2.5
SMC5Q8IY18 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.66■■■□□ 2.5
SMC5Q8IY18 CR559946.2-201ENST00000623684 991 ntBASIC30.66■■■□□ 2.5
SMC5Q8IY18 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SMC5Q8IY18 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
SMC5Q8IY18 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.65■■■□□ 2.5
SMC5Q8IY18 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.65■■■□□ 2.5
SMC5Q8IY18 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.65■■■□□ 2.5
SMC5Q8IY18 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SMC5Q8IY18 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMC5Q8IY18 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.64■■■□□ 2.5
SMC5Q8IY18 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMC5Q8IY18 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SMC5Q8IY18 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
SMC5Q8IY18 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.63■■■□□ 2.49
SMC5Q8IY18 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.63■■■□□ 2.49
SMC5Q8IY18 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMC5Q8IY18 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.63■■■□□ 2.49
SMC5Q8IY18 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.63■■■□□ 2.49
SMC5Q8IY18 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMC5Q8IY18 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMC5Q8IY18 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SMC5Q8IY18 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMC5Q8IY18 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SMC5Q8IY18 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMC5Q8IY18 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
SMC5Q8IY18 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.61■■■□□ 2.49
SMC5Q8IY18 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SMC5Q8IY18 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
SMC5Q8IY18 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SMC5Q8IY18 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC30.6■■■□□ 2.49
SMC5Q8IY18 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.6■■■□□ 2.49
SMC5Q8IY18 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms