Protein–RNA interactions for Protein: Q7Z419

RNF144B, E3 ubiquitin-protein ligase RNF144B, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144BQ7Z419 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF144BQ7Z419 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF144BQ7Z419 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144BQ7Z419 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144BQ7Z419 AC142472.1-201ENST00000612013 1741 ntBASIC21.18■□□□□ 0.98
RNF144BQ7Z419 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144BQ7Z419 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF144BQ7Z419 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF144BQ7Z419 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF144BQ7Z419 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144BQ7Z419 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144BQ7Z419 DUSP8P4-201ENST00000399538 1761 ntBASIC21.16■□□□□ 0.98
RNF144BQ7Z419 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF144BQ7Z419 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF144BQ7Z419 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144BQ7Z419 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144BQ7Z419 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144BQ7Z419 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144BQ7Z419 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF144BQ7Z419 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF144BQ7Z419 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF144BQ7Z419 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
RNF144BQ7Z419 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
RNF144BQ7Z419 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.98
RNF144BQ7Z419 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF144BQ7Z419 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF144BQ7Z419 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF144BQ7Z419 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144BQ7Z419 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF144BQ7Z419 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF144BQ7Z419 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
RNF144BQ7Z419 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF144BQ7Z419 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF144BQ7Z419 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF144BQ7Z419 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF144BQ7Z419 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144BQ7Z419 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF144BQ7Z419 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144BQ7Z419 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF144BQ7Z419 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF144BQ7Z419 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144BQ7Z419 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144BQ7Z419 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144BQ7Z419 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF144BQ7Z419 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF144BQ7Z419 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF144BQ7Z419 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF144BQ7Z419 ERN1-208ENST00000606895 2068 ntBASIC21.08■□□□□ 0.96
RNF144BQ7Z419 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144BQ7Z419 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144BQ7Z419 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF144BQ7Z419 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF144BQ7Z419 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144BQ7Z419 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144BQ7Z419 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF144BQ7Z419 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 LINC01971-201ENST00000617888 1048 ntBASIC21.05■□□□□ 0.96
RNF144BQ7Z419 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144BQ7Z419 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144BQ7Z419 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms