Protein–RNA interactions for Protein: Q6P3X8

PGBD2, PiggyBac transposable element-derived protein 2, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2Q6P3X8 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PGBD2Q6P3X8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.59■■□□□ 1.21
PGBD2Q6P3X8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PGBD2Q6P3X8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PGBD2Q6P3X8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PGBD2Q6P3X8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PGBD2Q6P3X8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PGBD2Q6P3X8 AP006261.1-201ENST00000584783 668 ntBASIC22.58■■□□□ 1.21
PGBD2Q6P3X8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PGBD2Q6P3X8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PGBD2Q6P3X8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PGBD2Q6P3X8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PGBD2Q6P3X8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.57■■□□□ 1.2
PGBD2Q6P3X8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PGBD2Q6P3X8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PGBD2Q6P3X8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PGBD2Q6P3X8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PGBD2Q6P3X8 AC087741.3-201ENST00000624270 1347 ntBASIC22.56■■□□□ 1.2
PGBD2Q6P3X8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PGBD2Q6P3X8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PGBD2Q6P3X8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PGBD2Q6P3X8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PGBD2Q6P3X8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PGBD2Q6P3X8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PGBD2Q6P3X8 WHAMMP3-201ENST00000611636 1609 ntBASIC22.54■■□□□ 1.2
PGBD2Q6P3X8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.54■■□□□ 1.2
PGBD2Q6P3X8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PGBD2Q6P3X8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PGBD2Q6P3X8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.53■■□□□ 1.2
PGBD2Q6P3X8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.53■■□□□ 1.2
PGBD2Q6P3X8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PGBD2Q6P3X8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PGBD2Q6P3X8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PGBD2Q6P3X8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PGBD2Q6P3X8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PGBD2Q6P3X8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PGBD2Q6P3X8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
PGBD2Q6P3X8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PGBD2Q6P3X8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PGBD2Q6P3X8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PGBD2Q6P3X8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGBD2Q6P3X8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PGBD2Q6P3X8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
PGBD2Q6P3X8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PGBD2Q6P3X8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.49■■□□□ 1.19
PGBD2Q6P3X8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PGBD2Q6P3X8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PGBD2Q6P3X8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PGBD2Q6P3X8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PGBD2Q6P3X8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PGBD2Q6P3X8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.19
PGBD2Q6P3X8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PGBD2Q6P3X8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD2Q6P3X8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD2Q6P3X8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD2Q6P3X8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PGBD2Q6P3X8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 AL162393.1-201ENST00000437852 946 ntBASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PGBD2Q6P3X8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 AC044849.2-201ENST00000606596 710 ntBASIC22.43■■□□□ 1.18
PGBD2Q6P3X8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms