Protein–RNA interactions for Protein: Q3ZLR7

SUPT20HL1, Transcription factor SPT20 homolog-like 1, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20HL1Q3ZLR7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
SUPT20HL1Q3ZLR7 AC009299.2-201ENST00000482477 511 ntBASIC29.52■■■□□ 2.32
SUPT20HL1Q3ZLR7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
SUPT20HL1Q3ZLR7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SUPT20HL1Q3ZLR7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.51■■■□□ 2.31
SUPT20HL1Q3ZLR7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SUPT20HL1Q3ZLR7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
SUPT20HL1Q3ZLR7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 AL592295.1-201ENST00000400984 884 ntBASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 AC103834.1-201ENST00000520383 144 ntBASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SUPT20HL1Q3ZLR7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.49■■■□□ 2.31
SUPT20HL1Q3ZLR7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SUPT20HL1Q3ZLR7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SUPT20HL1Q3ZLR7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SUPT20HL1Q3ZLR7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SUPT20HL1Q3ZLR7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SUPT20HL1Q3ZLR7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SUPT20HL1Q3ZLR7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SUPT20HL1Q3ZLR7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SUPT20HL1Q3ZLR7 HES6-204ENST00000409182 863 ntTSL 2 BASIC29.45■■■□□ 2.31
SUPT20HL1Q3ZLR7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.45■■■□□ 2.31
SUPT20HL1Q3ZLR7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.45■■■□□ 2.31
SUPT20HL1Q3ZLR7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.3
SUPT20HL1Q3ZLR7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SUPT20HL1Q3ZLR7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SUPT20HL1Q3ZLR7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SUPT20HL1Q3ZLR7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SUPT20HL1Q3ZLR7 PVT1_1.1-201ENST00000615125 194 ntBASIC29.44■■■□□ 2.3
SUPT20HL1Q3ZLR7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SUPT20HL1Q3ZLR7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
SUPT20HL1Q3ZLR7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
SUPT20HL1Q3ZLR7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
SUPT20HL1Q3ZLR7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.41■■■□□ 2.3
SUPT20HL1Q3ZLR7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.41■■■□□ 2.3
SUPT20HL1Q3ZLR7 MIR4508-201ENST00000584178 70 ntBASIC29.41■■■□□ 2.3
SUPT20HL1Q3ZLR7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SUPT20HL1Q3ZLR7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
SUPT20HL1Q3ZLR7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.39■■■□□ 2.3
SUPT20HL1Q3ZLR7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.39■■■□□ 2.3
SUPT20HL1Q3ZLR7 AP002414.2-202ENST00000590929 1450 ntBASIC29.39■■■□□ 2.3
SUPT20HL1Q3ZLR7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SUPT20HL1Q3ZLR7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
SUPT20HL1Q3ZLR7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SUPT20HL1Q3ZLR7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.38■■■□□ 2.29
SUPT20HL1Q3ZLR7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SUPT20HL1Q3ZLR7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.37■■■□□ 2.29
SUPT20HL1Q3ZLR7 AC131212.1-201ENST00000613771 668 ntBASIC29.36■■■□□ 2.29
SUPT20HL1Q3ZLR7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SUPT20HL1Q3ZLR7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SUPT20HL1Q3ZLR7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 OR2A1-AS1-204ENST00000470435 602 ntBASIC29.35■■■□□ 2.29
SUPT20HL1Q3ZLR7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 GUSBP5-201ENST00000418136 578 ntBASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 ABCB10P3-201ENST00000561950 2166 ntBASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
SUPT20HL1Q3ZLR7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC29.33■■■□□ 2.29
SUPT20HL1Q3ZLR7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
SUPT20HL1Q3ZLR7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
SUPT20HL1Q3ZLR7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
SUPT20HL1Q3ZLR7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
SUPT20HL1Q3ZLR7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC29.32■■■□□ 2.28
SUPT20HL1Q3ZLR7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
SUPT20HL1Q3ZLR7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SUPT20HL1Q3ZLR7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SUPT20HL1Q3ZLR7 THA1P-201ENST00000590384 1145 ntBASIC29.31■■■□□ 2.28
SUPT20HL1Q3ZLR7 AL139393.2-201ENST00000608721 2025 ntBASIC29.31■■■□□ 2.28
SUPT20HL1Q3ZLR7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
SUPT20HL1Q3ZLR7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
SUPT20HL1Q3ZLR7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SUPT20HL1Q3ZLR7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
SUPT20HL1Q3ZLR7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SUPT20HL1Q3ZLR7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.29■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms