Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.84■■□□□ 1.09
HCFC1P51610 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC1P51610 AC009299.2-201ENST00000482477 511 ntBASIC21.84■■□□□ 1.09
HCFC1P51610 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HCFC1P51610 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
HCFC1P51610 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.84■■□□□ 1.09
HCFC1P51610 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HCFC1P51610 ABCB10P3-201ENST00000561950 2166 ntBASIC21.84■■□□□ 1.09
HCFC1P51610 AL359258.2-201ENST00000564063 1566 ntBASIC21.83■■□□□ 1.09
HCFC1P51610 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC1P51610 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HCFC1P51610 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.83■■□□□ 1.09
HCFC1P51610 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.83■■□□□ 1.09
HCFC1P51610 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HCFC1P51610 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HCFC1P51610 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.82■■□□□ 1.08
HCFC1P51610 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HCFC1P51610 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1P51610 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.81■■□□□ 1.08
HCFC1P51610 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC1P51610 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1P51610 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HCFC1P51610 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.81■■□□□ 1.08
HCFC1P51610 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1P51610 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1P51610 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HCFC1P51610 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1P51610 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
HCFC1P51610 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HCFC1P51610 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCFC1P51610 RP9P-202ENST00000450133 1212 ntBASIC21.8■■□□□ 1.08
HCFC1P51610 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.8■■□□□ 1.08
HCFC1P51610 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HCFC1P51610 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.79■■□□□ 1.08
HCFC1P51610 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.79■■□□□ 1.08
HCFC1P51610 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HCFC1P51610 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCFC1P51610 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HCFC1P51610 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HCFC1P51610 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCFC1P51610 PVT1_1.1-201ENST00000615125 194 ntBASIC21.78■■□□□ 1.08
HCFC1P51610 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.77■■□□□ 1.08
HCFC1P51610 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1P51610 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.77■■□□□ 1.08
HCFC1P51610 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1P51610 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCFC1P51610 AL592295.1-201ENST00000400984 884 ntBASIC21.77■■□□□ 1.07
HCFC1P51610 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.07
HCFC1P51610 MIR4508-201ENST00000584178 70 ntBASIC21.77■■□□□ 1.07
HCFC1P51610 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HCFC1P51610 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC1P51610 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC1P51610 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HCFC1P51610 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HCFC1P51610 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HCFC1P51610 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC1P51610 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.75■■□□□ 1.07
HCFC1P51610 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC1P51610 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.75■■□□□ 1.07
HCFC1P51610 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC1P51610 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.75■■□□□ 1.07
HCFC1P51610 AC139795.1-202ENST00000500444 432 ntBASIC21.75■■□□□ 1.07
HCFC1P51610 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.75■■□□□ 1.07
HCFC1P51610 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCFC1P51610 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC1P51610 MIR6765-201ENST00000614092 87 ntBASIC21.74■■□□□ 1.07
HCFC1P51610 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC1P51610 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCFC1P51610 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.74■■□□□ 1.07
HCFC1P51610 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
HCFC1P51610 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
HCFC1P51610 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC1P51610 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC1P51610 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCFC1P51610 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCFC1P51610 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.72■■□□□ 1.07
HCFC1P51610 AC103724.3-201ENST00000564481 992 ntBASIC21.72■■□□□ 1.07
HCFC1P51610 AC010980.1-201ENST00000587192 1142 ntBASIC21.72■■□□□ 1.07
HCFC1P51610 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
HCFC1P51610 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC1P51610 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
HCFC1P51610 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC1P51610 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC1P51610 AC139426.1-201ENST00000568218 2529 ntBASIC21.71■■□□□ 1.07
HCFC1P51610 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCFC1P51610 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
HCFC1P51610 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
HCFC1P51610 MIR3960-201ENST00000583311 91 ntBASIC21.7■■□□□ 1.06
HCFC1P51610 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HCFC1P51610 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC1P51610 KRT8P33-201ENST00000508125 1423 ntBASIC21.7■■□□□ 1.06
HCFC1P51610 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC1P51610 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCFC1P51610 AC074183.2-201ENST00000623112 922 ntBASIC21.7■■□□□ 1.06
HCFC1P51610 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC1P51610 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC1P51610 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC1P51610 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCFC1P51610 AC019069.1-201ENST00000610008 1333 ntBASIC21.69■■□□□ 1.06
HCFC1P51610 AP002414.2-202ENST00000590929 1450 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms